KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110168716
Entry
110168716         CDS       T05002                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110168716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpec03019]
    110168716
   03036 Chromosome and associated proteins [BR:bpec03036]
    110168716
Messenger RNA biogenesis [BR:bpec03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     110168716
Chromosome and associated proteins [BR:bpec03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     110168716
    COMPASS/SET1 complex (yeast)
     110168716
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR55 EIF3I ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_HPS5 NBCH_WD40 DUF6834_C Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 110168716
NCBI-ProteinID: XP_020789863
LinkDB
Position
Unknown
AA seq 336 aa
MHICFHPSIPLHKPQNMRITDGVLRSFRVARTYREHVEKVNCVDFSPNGENAVSSSDDDS
IILYDMREEGRPSGTLYSKKYGVDLIRYTHSDVDTVVFSSNKLDGAYYIIVTFSNHDDKK
IIRYFPGHTASVISLSMSPVDDTFISSSLDKTIRIWDLRSPNCQGLTNPLGTPVCSFDPD
GLIFAAGVDSQLLKLYDLRAFDKGPFASFETIFNRLCDWTGLKFSYNGKQILISTNGGMI
RVLNAFSGAVLHTFSGYNNSRGIPLEACFTPDSQFVMIGSEDGRVHVWSTDSGMKVAVLD
GKHPGPINSLQFNPRYMTFASACSNMTFWLPCVDDL
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgcacatttgttttcaccctagcatacctttgcataaacctcaaaacatgagaatcaca
gatggcgttttgcgaagttttagagtcgcaaggacctaccgggagcatgtagagaaagtc
aactgtgtggatttcagcccaaacggtgaaaatgcggtatctagcagcgacgacgactct
attatattgtatgacatgagggaagagggaagaccatcaggaaccctgtacagcaaaaag
tatggagttgatctgatccgctacacacacagtgatgtggacactgtggttttcagctcc
aacaaactggatggtgcttattatattatagttaccttttctaatcatgatgacaaaaaa
atcatcagatattttccaggccatacagcaagtgtcatttccctctcaatgtcgcctgtg
gatgacacatttatctcaagttctttggataagacaattcgcatctgggatctgcgctca
ccgaactgtcagggcctaaccaatcctttggggacacctgtgtgctcctttgaccctgat
ggtctgatatttgctgctggtgttgactcacagcttcttaaattatatgacctacgagct
tttgacaagggcccctttgcttcatttgagacaatttttaatcgtttgtgtgactggact
ggacttaaattcagttataatggcaaacagattctcatctctacaaatggagggatgatt
cgtgtcttgaatgctttcagtggagcagtgctacacaccttttcaggttacaacaacagc
agaggtattccattagaggcgtgctttacccctgactctcaatttgtcatgattggctca
gaggatgggcgagtccatgtttggagtactgacagtgggatgaaggtggctgtgctggat
ggcaaacatccaggacccatcaactccctgcagttcaaccccagatatatgacatttgca
agtgcatgctccaacatgacattttggctcccctgtgttgatgacctttaa

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