KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110169037
Entry
110169037         CDS       T05002                                 
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:bpec04812]
    110169037 (katnb1)
Cytoskeleton proteins [BR:bpec04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     110169037 (katnb1)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 Katanin_con80 WD40_Prp19 Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_EML WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_RIG_1st PROPPIN Beta-prop_VPS8 Beta-prop_LRRK2 Beta-prop_IP5PC_F WD_LRWD1 RMC1_N Ge1_WD40 Beta-prop_IFT122_2nd Cytochrom_D1
Other DBs
NCBI-GeneID: 110169037
NCBI-ProteinID: XP_020790198
LinkDB
Position
Unknown
AA seq 711 aa
MAAVGSTKISWRLQEFAAHTSTVSCLSLGKSSGRLLATGGEDCRVNIWAVSKTNCIMSLT
GSKSPVECLQLNASEEQVVAGSQSGSIKIWDLEAAKLLRTLMGHKANITSLGCHPMSENF
LASSSMDTNIKLWDVRRKGYIFRYQGHTEAVRSLAFSPDGKWLASASDDCTVKLWDLGAG
KAITEFKSHSGAVNIVQFHPNEYLLASGSADRTIKLWELEKFTLVGSLEGDTSAVRSVCF
SPDGSCLYSGSSDTLRVFGWEPERCFDVVSVGWGKVSDLSICNQQLIGASHHLSTVSTFV
VDLKRVKKNGGAVIQGIIQDDQPLSAPSEHKGGALRRSYEKPTTTCAAQRVKKNSEGDRH
SPEGERRSPSEDEGDEKLSSAEIHNADDYKEIFQPKNAISRTPPKFHEPFPAPPEDESVL
GITRKMKDIAPFSEKQQVPPIAQSTPVQRVEPTVVSCAKRPLPPADPPTAWPPPPPATIP
APGVTKAKPYPPPQQQQQPKSNPPKIILSSRNEPIGLNVADFLPPSVNNRAGALSEEEAL
SQIKKGHDTMCVMLSSRHKNLETVRGVWAREDIKRALDTAVSMNDLAIVVDILNIINLQP
AIWKLDLCMTVLPQIDKLLQSKYESYMQTGCTSLKLVMRHFWSLISDTLKATPSVGVDIT
REERHQKCRVCCKQLKNLSNIVKNKSSYVGRHGSVFKELQLLMAPLDDAAL
NT seq 2136 nt   +upstreamnt  +downstreamnt
atggccgctgtcggctccaccaagatctcatggagactgcaggagttcgcggcccacacc
agcaccgtgtcctgtctgtctctggggaaaagctcagggcgccttctagcgaccggagga
gaggactgcagggtgaacatctgggccgtcagcaaaaccaactgcatcatgagtctgacg
ggcagtaagagtccggtggagtgtctgcagctcaacgcctcagaggagcaggtcgtggcc
gggtctcagtccggatccatcaagatctgggacctggaggccgccaaacttttacgcact
ttaatgggacacaaagcaaacatcacgagtctgggctgtcacccgatgtctgaaaacttc
ctggcctcaagttctatggacacgaatattaagctgtgggacgtccggaggaaagggtac
atcttcagatatcagggtcacacagaggcagtgaggagtttggcctttagtcctgatggg
aagtggttggcttcagcgagtgacgactgcacagtgaagttgtgggacctgggagcgggc
aaagccatcacagagttcaagtctcactctggagccgtcaacatcgtccagtttcatccc
aacgagtatctgctggcttcaggcagtgcagacaggacgatcaagttgtgggagctggag
aagttcacattggtcggctctttggagggagacaccagcgcggtcaggtctgtctgcttc
agtcccgacggctcgtgtctctacagcggctcctcggacactctcagggtttttgggtgg
gagcccgagcgctgcttcgacgtggtgtctgtgggctggggcaaagtgtccgacctctcc
atctgcaaccaacagctgatcggagcgtcccaccacctctccactgtctccaccttcgtt
gtggatctgaagcgggtgaagaagaatggaggagccgtgatccagggaattatccaggac
gaccagcccctgtctgctccgagtgaacacaaaggaggagcactgagacgcagctacgag
aagcccaccactacctgcgccgcccagagggtgaagaagaactcagagggggacagacac
agtccagagggagagcggcgcagtcccagtgaagacgaaggagacgagaaactgtcctca
gccgaaatccacaatgcagacgactacaaggagatcttccagcccaagaacgccatctct
cggactcctccaaagtttcatgaaccttttcctgctccacctgaagatgagtctgttctg
ggcataactcgcaaaatgaaggacatcgctccattttctgaaaagcaacaagttcctccg
attgctcagtccacaccggtgcagagagtggagcccacagtagtgtcgtgtgcaaagcgc
cctctacctccggctgacccccccacagcctggccccctcctccccccgctacaatacct
gctccgggcgtcaccaaagccaaaccgtaccctcctccacagcagcagcaacagcccaaa
agcaacccgcccaaaatcatcctcagctccaggaacgaacccatcggactcaacgtggcc
gacttcctgcctccctctgttaataaccgtgccggggccctgagtgaggaggaggctctg
tcgcagataaagaaaggtcacgacaccatgtgtgtgatgctcagcagccgacacaagaac
ctggagacggtgagaggcgtctgggccagagaagacatcaagagagctctggacacggct
gtctctatgaacgacttggccatcgtcgtggacatcctcaacatcatcaacctgcagccg
gcaatctggaagctggatttatgcatgaccgttcttcctcagatcgataaactactgcag
agtaaatacgaaagttacatgcagaccggctgcacgtccctgaagctcgtcatgaggcat
ttctggtccctgatctcagacacgttaaaggccacgccgtcggtcggagtcgacatcaca
cgagaggaaagacaccagaagtgccgcgtgtgctgtaagcagctgaagaacctcagtaac
atcgtcaagaacaagtcttcgtacgtcggtcgccacggcagcgtcttcaaagagctgcag
ctcctgatggctcctctggacgacgctgcgctctga

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