Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110169201
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Entry
110169201 CDS
T05002
Symbol
vps4a
Name
(RefSeq) vacuolar protein sorting-associated protein 4A isoform X1
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03250
Viral life cycle - HIV-1
bpec03272
Virion - Hepatitis viruses
bpec04144
Endocytosis
bpec04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110169201 (vps4a)
03272 Virion - Hepatitis viruses
110169201 (vps4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110169201 (vps4a)
09143 Cell growth and death
04217 Necroptosis
110169201 (vps4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpec04131
]
110169201 (vps4a)
03400 DNA repair and recombination proteins [BR:
bpec03400
]
110169201 (vps4a)
Membrane trafficking [BR:
bpec04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
110169201 (vps4a)
DNA repair and recombination proteins [BR:
bpec03400
]
Eukaryotic type
Check point factors
Other check point factors
110169201 (vps4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
AAA_16
TIP49
AAA_22
AAA_14
AAA_5
RuvB_N
AAA_25
IstB_IS21
DUF815
AAA_2
AAA_18
AAA_17
RNA_helicase
AAA_33
nSTAND3
nSTAND_NTPase5
PhoH
NPHP3_N
AAA_28
YhdB
ResIII
AAA_24
AAA_7
Mg_chelatase
Parvo_NS1
NACHT
Viral_helicase1
bpMoxR
AAA_30
Motif
Other DBs
NCBI-GeneID:
110169201
NCBI-ProteinID:
XP_020790379
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHSVEYFLHAIKYEAHSDKAKESIRAKC
MQYLDRAEKLKDYLKNKDKQGKKPVKEAQSNDKSDSDSEGENPEKKKLQEQLMGAIVMEK
PNVRWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVA
TEANNSTFFSVSSSDLMSKWLGESEKLVKNLFDLARQHKPSIIFIDEVDSLCGSRNENES
EAARRIKTEFLVQMQGVGNNNDGILVLGATNIPWVLDAAIRRRFEKRIYIPLPEEPARAH
MFRLHLGNTPHSLSDADLRQLAHKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVCGP
SRSNNQVMVDDLLTPCSPGDPAAIEMTWMDVPSDKLLEPIVCMSDMLRSLSTTRPTVNTE
DLLKVKKFTEDFGMEG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtcaacattacagaaagcaattgatctcgtaaccaaagcgactgaggaggac
aaagcaaagaactatgaggaggccctgcgtttgtaccagcactctgtggagtacttccta
catgccatcaaatatgaggcccacagtgacaaggcaaaagaaagcatccgggccaagtgt
atgcagtacctggaccgagctgaaaaactcaaagactacctgaagaacaaagataaacaa
ggcaagaaaccagtgaaggaagcgcagagcaatgacaagagcgacagtgacagtgaagga
gaaaacccagagaagaaaaagctccaggagcagttaatgggtgctattgtcatggagaag
cccaatgtgcggtggagtgatgtggccgggctggagggagctaaagaagctttgaaggag
gctgttatcctgcccattaaattcccacatctgttcacagggaagcggactccatggagg
ggcatcctactctttggacccccagggacaggaaagtcctaccttgccaaggcagtggcc
actgaagccaacaactccaccttcttctcagtgtcctcttcagatctgatgtctaagtgg
ctgggagagagtgaaaaactggtgaagaatctgtttgacttggcacggcagcacaagcct
tccatcatcttcattgacgaggtggactcactgtgcggctccagaaacgagaacgagagt
gaggcggcgcgacgcatcaagactgagtttctggtgcaaatgcagggtgtgggcaacaat
aatgatggcatcctggtgctgggagccaccaacatcccctgggtcctggacgcagccata
cgcagaagatttgagaaaaggatctacatcccgctgccagaggagccggcacgagcacac
atgttccggctgcacctggggaacacgcctcatagcctgagtgatgcagatctgaggcag
ctcgcccacaagaccgatggctactcaggggctgacatcagcatcatcgtacgggatgct
ctcatgcagcctgtgcgcaaagtgcagtctgccacacacttcaagaaggtgtgtggtcct
tcccgaagtaacaaccaggtcatggtggatgacctcttgaccccttgctcccctggtgac
cctgctgccatagagatgacctggatggatgtgcctagtgataagcttctggagcctata
gtgtgcatgtcggacatgctgcgctctctgtccaccactcggcccacagtcaacactgaa
gacctgctcaaagtcaagaagttcactgaggactttggcatggagggctga
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