Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110169278
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Entry
110169278 CDS
T05002
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bpec01009
]
110169278
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bpec04515
]
110169278
Protein phosphatases and associated proteins [BR:
bpec01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110169278
Cell adhesion molecules [BR:
bpec04515
]
Cadherins
Protocadherins
110169278
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
110169278
NCBI-ProteinID:
XP_020790456
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MGGVMAASSSLHHFLLLLLSSVLFLSACLAAPTDILYRVAEEQPPNSLIGSLAADQGLPD
SGHLYKLEVGAPYLRVDSKTGEIYTTETPIDRELLKDCRNLLDDDKCFLEFEVSITDMVK
GMGPRLIEGRIEVLDINDNTPQFVSPVMTLSIPENTHVGALFSIPMANDRDSGVNGVDRY
SLSTRDDFEQLFSLQVATDSDEKVPQLVVMGSLDREAKESYDMNILVVDGGTPERQSSAL
LRVLITDQNDNAPKFERSHYEANLLENSPLGHSVVQVRATDADSGVNAEIDYSIHQASDT
VQRLLRIDRSTGIIYVKGPVDREEENFLKFFVVARDRGPNSKSSKVLVTVIIKDQNDNAP
AIEIRGIGLVTHDNGVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPA
SESANDRKRKYFLQTTTLLDFERVKDYRIEIVAVDSGNPALSSTNSLRVQVTDINDNAPV
FSPAVLEVDFAEENQPGDKVLDVIATDADSGINAELVYSIVEDAGRPRRLFEIDTTTGEI
TVKNLLDREEIERYEFCVAAADKGVPSKTGTATVIINVLDRNDNDPKFMLSSYSFSINEN
MPPLNPVGVVTVSDADKGENARVKLYVEPDNGKFFIQNGTGTILSSISFDREKESTYTFR
LKAVDSGDPPRSSYAGVTINVLDENDNAPYVTKPANSSYTFLKRGTPPETVIEVVEAEDM
DSGLNSDLDFTITGGNPYGLFQISPSTGEIKLEQEFSAKHNGLHRLVVKVSDKGKPQRHT
TALVHVYVNDTKANVSQIEALVGHSLYTPLDHDIAGDPNYIKAQRNLHIMYGVLAGLAGV
TMVIVIVVVVRQRLQKDTKSGYQPGKKESKDLYAPKQGPKNNKAKKAKKGKAPKPSKPLE
EDEEASLQKGLKFNLINDNVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPS
ASKKHQAVQDLPATNTFVGDNNSTGSDQYSDYSYKAPKYTNKQVGDYANAPVYNNHNIYW
TNRVW
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgggcggagtcatggctgcgtcctcctccttacatcacttcctcctcctcctcctgtcc
tccgtcctgttcctgagcgcctgcctggccgcgcccaccgacattctgtaccgcgtcgcc
gaagagcaaccgcccaactcgctcatcgggagtctggccgccgaccagggcctccccgac
agcggccacctctacaagctcgaggtgggcgccccctacctgcgcgtcgacagcaaaacg
ggcgagatctacaccacggagacgcccatcgaccgcgaactcctcaaggactgtcgcaac
cttttagacgacgacaaatgcttcctggaattcgaggtctccatcacggacatggtcaaa
gggatggggccgaggttgatagaaggtcgcatcgaggtcctggacattaacgacaacacg
ccgcagttcgtctcgccggtcatgacgctgtccataccggaaaacacgcacgtcggagcg
ctgttctcgatcccgatggcgaacgaccgagactccggcgtcaacggggtggacaggtac
tcgctgagcaccagggacgatttcgagcagctcttcagccttcaggtggcgacggattcg
gacgaaaaagttccgcagttggtggtcatgggcagcctggaccgggaggcgaaagagtcg
tacgatatgaacattctggtggtggacggcgggacccccgagaggcagagcagcgctttg
ctcagggtcctgatcaccgaccagaacgacaacgcgccgaagttcgagaggagtcactac
gaggcgaacctgctggagaacagtccgctggggcactccgtcgtacaggtccgagctaca
gacgccgacagtggagtgaacgccgagatcgactactccatccaccaggcctccgacacc
gtccagaggctgctccgaatcgaccgctccaccgggatcatctacgtcaagggccccgtc
gaccgcgaggaggagaacttccttaaattcttcgtagtcgcccgagaccgtggccccaac
tccaaaagctccaaagtcttagtcaccgtcatcatcaaggaccagaacgacaacgcgccc
gccatcgaaatccgcgggatcggacttgtcactcacgacaacggcgtcgccaacatttcc
gaagacatgcccatcggaacgccggtcgctttggtgcaggtttccgaccgcgacgaggga
gaaaacgccgtggtgacctgcgtggttgccggcgacgtccccttccagctgcgcccggcc
agcgagtcggcaaacgatcgcaagaggaaatactttcttcagaccacgacgcttctggat
ttcgagcgtgttaaggattaccgtattgaaatcgtggcggtggattctggaaaccccgcg
ctctctagcaccaactctttgcgagtacaagtcacagatattaacgataatgcgccagtg
ttttcgccagcggtcctcgaagtggactttgctgaagaaaaccaaccgggggataaagtt
ttagacgttattgctacagacgcagacagcggcatcaatgcggaactcgtgtacagcatt
gtggaagatgcggggcggccacgtcggctttttgaaatcgacacaaccaccggggagatc
acagttaaaaatcttttagacagggaggaaatagaaagatacgaattttgcgtcgcagct
gctgataaaggcgtaccaagcaaaaccggtaccgccactgtcatcattaacgtcttggat
cgcaacgacaacgatcccaaattcatgctaagcagctatagcttttccatcaacgaaaac
atgcctccgctgaacccggtcggcgtggtaacagtctccgacgcggacaaaggcgaaaac
gcaagagttaagctgtacgtcgaaccggataacggaaaattctttattcaaaacggcacg
ggaactattctgtccagtatttccttcgaccgcgagaaggaaagcacgtacactttccga
ctgaaagcggtcgattccggagacccacctcgctcttcctacgccggcgtcaccattaac
gttttggacgagaacgacaacgctccctacgtcaccaaacccgcaaattcatcgtacacg
ttcttgaagcggggaactccgccggaaacggtcatcgaagtcgtagaagcggaggatatg
gactctgggctgaactcggatttggatttcacgatcacgggaggcaacccttacggactg
ttccaaatctcgccgtcgaccggagagatcaagctggagcaagagttcagcgcgaagcac
aacgggctgcatcgtctggtcgtaaaagttagcgataagggtaaaccccaacggcacacc
acggcgttagtccacgtgtatgtgaacgacacgaaagccaacgtatcgcaaatcgaagct
ctggttggacacagcctgtacaccccgctggaccacgacatcgccggagaccccaactac
atcaaagcgcaacgcaacttgcacatcatgtacggcgtcctggccgggctcgctggcgtc
accatggtcatcgtgatcgtcgtcgtcgtgcgccaacgtttacaaaaggacaccaagagc
gggtaccaaccgggcaagaaagaaagcaaagacttgtacgcgccaaagcaaggaccaaaa
aacaacaaagctaaaaaagccaaaaaggggaaagcgcccaaaccctcgaagccgctcgag
gaagacgaggaggcgagcttgcaaaaggggctaaagttcaatctcataaacgacaacgtc
aacgacagccccaggatccacttgccgctcaactacccgccgggaagccccgatttggga
cgccactaccgctcgaattcgcccctcccttccatccagctccaaccgcaatctccgtcc
gcgtccaaaaagcaccaagccgtccaggacctccccgccaccaacactttcgtaggggat
aacaactccaccggatctgatcaatattcggattatagctacaaggctccgaagtacacc
aacaaacaggtaggcgactacgctaatgcgcctgtgtacaacaatcacaacatctactgg
accaaccgcgtgtggtag
DBGET
integrated database retrieval system
