Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110169341
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Entry
110169341 CDS
T05002
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110169341 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110169341 (edc4)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110169341 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
110169341 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
PIN_8
Motif
Other DBs
NCBI-GeneID:
110169341
NCBI-ProteinID:
XP_020790524
LinkDB
All DBs
Position
Unknown
AA seq
1379 aa
AA seq
DB search
MASNSNIDIEGATQHLRDILKLDRAGPDAQSSDEQRKSSFNGELNGLLGAAGLLGSVDHS
LTTELSRPISQDMSSSKDSQIIRLSGDNGSTCKPITSNNVEIVASQDSSINSKARGSNKV
KIQPVAKYDWEHKYYYGRLIAVSNSFLAYAIKGANNHAMIRVLSIGFTERALLKGFTGAV
TDLAFAHLDSSLLGCVDEAGNLVVWQLTCTPSKILDEVVVHIRRPENTPLNPHRRLIWCP
FILDDNEENQDDISQTLALLHEDRAEVWDLEALRANYSTWPIDASDVREGLITVKGHTQR
VSEGALSPDGTVLATASHDGYIKFWQIYIEGAQDKPRCLHELRPHGGQPLSCLLFCDNHK
RQDPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDPYNSTVLPSLKASLDLSAE
YLILTDVQRKVLYVMELEQDLEKGKASFTAVSEFLLTHPVLSFGVRDVTQSRLRHTEVLP
AEEEGESLTTEGSQGAAESKSGIQIKLYCVHTKSLQDVQILFQSNVGSSPADFLPHSDSQ
DGFGFSDHLTDQSSDKDSGSGSQTDLRKIPSLPAPADFLTNSAAKLMTPDAFMTPSTSVP
ASPGSSASSLTIVTAISSNSDSTNRALDDVSQSPNRVENSSSSLGLSASCSSPRAVSALL
PALDGIQAPSGPLVLDGPQVLDSPLLPPLASPTRARSPDVISSASTVMSQDMPEIASQTL
QLQRGLVSTMDPLPLSTLQTDSMASAASALHLLTSPRAANNSFLPLELGGAEGPVGGSSE
AENRLSHTPSLLETALPQENPGVCAGASDGSVAHTPWPAAPDITRETRNSLRDNGIVDCS
REDSKDGHLTSPYHRRSYHLTPNDSQDPGTEQSDPDDEVASLASSSGNCASRSAHRMQVK
EWKGSPRSSPKLKRKNKKEDRESSQLRQYSPGQVNSEVQEELLMLLRNQQRELTDLRGQI
EAMKCSIMSQVEHTLSSYQEQEQRRMERLLVESQSQQQQLQEHLSQHLSQTLSSALTNRM
DRVLREEMKKTIPQTISKSLEPVSGQMNNTIAAKLTAVEVTLKDNVTKVVKSKNTTDAIG
RAAAEAMQGSIQAAYKDAFQTVVLPVFERGCQSMFQQINDSFKQGTQEYIQQLESHVKNR
KQREQDARDPMIAQLQQMIDSFQNSTEQLSTSITANVRAEVQHQVQMMVGNLQESILSHV
QRIVKGEVSLAMKEQQAVVTSSIMQAMRSAAGTPVPTAHLDYQTQQANILQLLQQGQLNQ
AFQQALSATDLNLVLYVCETIDSQQVFGQHPCPLSQPVLLSLIQQLSSNLSTRSELKISY
LEDAVMNLDHSDPLTRDHMASVLAQVRPKLFSYLQQDPHSALSKRARRLMMMLQGLVNH
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaattcaaatattgacattgagggtgcgacgcagcatttgcgggacatcctg
aagctggaccgcgccggccctgatgcccagtcatcagatgaacagaggaaatcttctttt
aatggagagctgaacgggttattgggagctgcaggacttcttgggagtgttgatcactct
ctcacgacagaattatccaggcccatttcccaagacatgagtagctccaaggacagtcag
ataatccgcctttctggtgataatgggtccacttgtaaacccatcacttctaacaatgtg
gagatagtggcaagtcaagactcaagcatcaacagcaaagctcgtggcagtaacaaggtg
aagattcagccagttgcaaagtatgattgggaacacaaatattactacggcagacttata
gccgtctcaaattcatttttggcttatgctattaaaggggctaacaaccatgcaatgatt
cgtgtcttgagcattggttttactgagcgtgcactgctcaaaggattcactggagccgtc
acagatctggcttttgcccaccttgactcctctcttttgggatgtgtcgatgaagctggt
aatctggttgtctggcagctcacttgcacacccagcaaaatcctggatgaagttgttgtt
catattcgccgtccagaaaatactccattgaatcctcatcgtcgtcttatttggtgcccg
tttatcttggatgataatgaggagaaccaggatgacatcagtcagacactagcacttcta
catgaagatagggctgaagtgtgggaccttgaagctctgagagctaactacagcacatgg
cctattgatgcatcagatgtcagagaaggcctgattacagtgaagggccatacacagagg
gttagtgaaggagcactttccccagatggtactgtgttggcaacagccagtcatgacgga
tacatcaagttctggcagatttacattgaaggtgcacaagataagccgaggtgtcttcat
gagttacggccccatggaggtcagcccctctcttgtcttttgttctgtgacaatcacaag
agacaagatcctgaggttccattctggcgctttctgattactggagctgatcagaaccag
gagttaaagatgtggtgtactgtgtcctggacatgtttacagactatcaggttttcccca
gatccctacaactccactgtacttccaagtcttaaggcgagcttagacctctctgctgag
tatttgattctcactgatgtgcaacggaaggttctctatgtgatggagttggagcaagac
cttgagaagggcaaggctagttttactgctgtatctgagtttctcctcactcacccagtg
ctcagctttggggtcagagatgtgacacagagtcgtctccgacataccgaggtcctgcca
gcagaagaagagggtgagagtttgacaacagaaggctctcaaggagctgcagagtctaag
tccggtattcaaattaaactctactgtgtccacacaaagagcctacaggatgttcaaata
ttatttcaatcaaatgtgggttctagtcctgcagatttcctgccacattcagattcacag
gatggctttgggttttcagaccatttgacagaccagagctcggacaaggactcggggagt
ggatcccagactgatctgaggaaaattccttctcttccagctccagccgactttctaaca
aactcagcggccaaactcatgactcctgatgcctttatgacaccaagcacttcggttcct
gcttcacctggtagtagtgcaagcagtctcacgattgtaactgctataagcagcaattca
gactcaaccaacagggcattggatgatgtgagccagagtccaaacagagtggagaacagc
agcagcagtctgggcctttctgcatcctgcagtagtccgagagcagtctctgcacttctt
cctgcactggatggcattcaggctcccagtggtccacttgttttggatggaccccaggtc
ctagactctcctcttctcccacccttggcctcaccaactcgagctcgctcccctgatgta
atctcgtctgcatccaccgtcatgtctcaggacatgccagagatcgcatctcagactctg
cagcttcagcgtggacttgtgtctacaatggaccctttacccctctcgactctgcagaca
gacagcatggcctctgctgcttctgcactgcacctgctcacctcaccacgggctgccaac
aacagctttttgcccctggagcttggaggtgctgagggtccagtgggtgggtcttcggag
gcagaaaacagactgagtcacactccgtctttactggaaacggcgctacctcaggagaac
cctggagtctgcgcaggagcctcagatggaagtgtagcccatacaccatggccagctgcc
cctgatattaccagagaaaccagaaacagtcttcgggacaatggcatagtagactgttca
agagaagattccaaagatggacacctaacttcaccttatcatcggcgctcctatcatctc
actccaaatgacagccaggacccaggaacagagcagagtgatcctgatgatgaggtagcc
agtctggcatcgtcttcaggaaactgtgcatcacgttcagctcacagaatgcaggtgaag
gaatggaagggctcaccacggagctcacctaaattaaagcgaaaaaacaagaaagaagac
agggaatcgtctcagctccggcagtatagtcctggacaggtgaattctgaggtgcaagag
gagctgttaatgcttttgcgcaaccagcagagggagttaactgatcttcgaggacaaatt
gaagccatgaagtgctccattatgtctcaggttgagcacactttgagcagctatcaggaa
caagagcagcgcaggatggagcggctgcttgttgaaagtcagagtcaacaacagcagctg
caggagcatctgagccagcacctcagccaaaccctgagctctgccctgaccaacaggatg
gaccgagtactgcgggaagagatgaagaaaactattccacaaacaatctccaagagtctg
gagcccgtttcaggtcaaatgaacaacacaattgctgctaaactgaccgctgtggaggtc
acactaaaagacaatgtcactaaagtggtcaaatcgaagaacacaacagatgctattggt
cgagctgcagcagaggccatgcagggatccatacaggcagcttataaagatgctttccag
actgttgtgcttcctgtgtttgagagaggctgccagtctatgtttcagcagattaacgat
agcttcaaacagggaacacaagaatacattcaacaacttgaaagtcacgtgaagaacaga
aagcaaagggagcaagatgcaagggaccccatgattgctcaactccagcagatgattgac
agcttccagaactccactgagcagttgagcaccagtatcactgctaatgtgcgggcagag
gtccagcaccaggtccagatgatggtgggaaatttgcaggagtctattcttagccacgta
cagaggattgttaaaggagaggtgagcctggcgatgaaagagcagcaggcagtggtcacc
tccagcatcatgcaggccatgaggtcagcagccggtacacctgtccccacggcccacctc
gactaccagacccaacaggccaacatcctccagctcctacagcagggacaactcaaccaa
gcctttcagcaggctctctcagcaacagacttgaacctggtgttgtatgtgtgtgagacc
atcgactcccagcaggtgtttggacagcacccctgtcccctcagccaaccagtgctgctg
tcactcatccagcagctctcctccaacctctccacccgctccgagctcaaaatcagttac
ttggaggatgctgtgatgaatctggaccacagcgaccctttgacccgtgatcacatggca
tcagttctggcccaggttcggcccaagctcttctcgtacctgcagcaggacccccacagt
gcgttgagcaagagggcccgccgtctcatgatgatgctgcagggcctggtcaaccactag
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integrated database retrieval system
