Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110169454
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Entry
110169454 CDS
T05002
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bpec04121
]
110169454
Enzymes [BR:
bpec01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110169454
Ubiquitin system [BR:
bpec04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
110169454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
110169454
NCBI-ProteinID:
XP_020790653
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGKELSKCGHDEGVASFCSAREPVVVQVIRRTASGR
PHGSPQEIHVVDVCTQTDITFEHIMALAKLRPSTPPVPDVCPFLLSDSCHSLHTMDQEYY
DGTAYLSPGAADVDRPEEFEYEEVELCRLTSQEKLGLTLCYRTDEEEDVAIYVSEISPNS
IAARDGRIREGDRILQINGQDVQDREEAMAALSNEECRRIVLLVARPELQLEEAWLDDEH
SEFLEQLKMEMLEEQRREEMEMAALEEEQRAEDERPSCSSLSHHTNHVPHTRERRGSAEN
VLTQIQRRLSQCLRDRDTHRPPGSTRLEDRDEDEDGDRFQQLLELKCQIRNSGEYDLFYS
RRSTIECSVAEQGSVQHELRMLNEELRSIEMECQNIMQAHKLRKGQESPSSGLSSKNQSP
KRGNQTRSKLTDINERLEKSDKDSSSAYNTAESSRSTPLQMERSPEHSLQRISLTNQRNL
SSGLARSQASPVPALRAPVLGKGSSPDHSNPSESDHAPQPEEDKQSSKVTASVSQIPYFS
PSHSSQQRQATIPAHARHYQSYMQLIQQRSAVEYAQSQLSLLSLCKEPQTPEPKMEWKVK
IRSDGTRYITKRPVRDKILRERALKIKEERSGGMTTDDDAMSEMKMGRYWSKEERKQHLV
RAKEQKKRREFMQRSRLESLKENPQSSSEARKEVSIIELSQKKMMKKRNKKILDNWMTIQ
ELMTHGTKAPEGAKVNNAFLSVTTV
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgcactttacagaagcgcgaggaacactacaagctgctgtatgag
atcgcacaggtgaatgggaaggagctttccaagtgcggccatgatgagggggtggcgtcc
ttctgcagtgctcgggagcctgttgtggtgcaggtcatccgcaggacagcaagcggccgc
cctcatggctcccctcaggagatccatgtggtggacgtgtgcacacagaccgacatcacc
tttgaacacatcatggctctggccaagctccgcccctctacgcccccagtgcctgatgtc
tgccccttcctgctctcagacagctgccactctctgcacacgatggaccaggagtactac
gatgggacagcctacctctccccgggagcagctgatgtagacagaccagaggagtttgag
tacgaggaagtggagctttgtcgactcaccagccaggagaagttggggctgacgttgtgc
tacaggacagacgaagaagaagatgtggcgatctatgtcagcgagatcagtccaaacagc
attgcagcgagagacgggcgcatccgagagggggaccgcatcttacagattaatgggcag
gatgtccaggacagagaggaggcaatggcggctctctctaatgaagaatgtaggagaatt
gtgctgctagtcgcccgaccagagttgcagctggaggaggcctggctggacgatgaacac
agcgagttcctggagcagctgaagatggagatgctggaggagcagcgtagagaggagatg
gagatggctgccttagaggaggaacagagagctgaagatgagcggccatcttgctcgtcc
ctgtctcaccacacaaaccatgtgccgcacacgagagagcgtcgggggagtgcagagaat
gtgctaactcagatccagaggcgtctgtcccagtgtctccgggacagggacacacaccga
ccccccggctccacgcgactagaggacagagatgaggacgaggacggagatcgcttccag
cagctcctggagctcaagtgtcagatccggaacagcggcgagtatgacctgttctacagc
cgccgcagcaccatcgagtgcagtgtggctgagcagggcagtgtgcagcacgagctgcgc
atgctcaatgaggaactgcgcagtatcgagatggagtgccagaacatcatgcaggctcat
aagctccgcaaaggccaggagtcaccctccagcggcctgtccagcaaaaaccaaagtcca
aagcgaggaaatcaaaccaggagcaagctgacggacataaacgagcggcttgagaaatcg
gacaaggacagctccagtgcctacaacacagcggaaagctcccgcagcacacctctgcag
atggagcgatctcctgaacactctctacagagaatcagcctgaccaaccagagaaacctc
tccagtgggctcgccaggagccaggccagcccggtgcccgccctcagagcccctgtcctg
gggaaaggcagtagtcctgaccacagtaacccctctgagtctgaccacgcccctcagcct
gaagaggacaagcaaagttcaaaggtcacagcctctgtttctcaaattccttatttctct
ccgtcccacagttcccagcagcgtcaggccaccatcccggcccacgcgcgtcattaccag
agctacatgcagctgatccagcagcgctcggctgtggagtatgctcagagccagctcagc
ctgctcagcctatgtaaggagcctcagacacctgagcccaaaatggagtggaaggtgaag
atccgcagtgacggcacccgttacatcaccaagagaccagtgagggacaagatcctgaga
gagcgcgccctgaagatcaaagaggagcgcagcggaggtatgaccactgatgatgacgcc
atgagcgagatgaagatgggtcgctactggagcaaagaggagaggaaacagcacctggtc
cgagccaaggagcagaagaagaggcgtgagtttatgcagcgcagtcgcctggagagtctg
aaggagaaccctcagagcagcagtgaggcccgcaaagaggtcagcatcatcgagctgagc
cagaagaaaatgatgaagaaacgcaacaagaagatcttggacaactggatgaccatccag
gaactgatgactcatggcaccaaggcaccagagggcgctaaagtgaacaatgcctttctc
tcagtgactactgtataa
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integrated database retrieval system
