Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110169606
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Entry
110169606 CDS
T05002
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bpec03036
]
110169606 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bpec04812
]
110169606 (nedd1)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
110169606 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
110169606 (nedd1)
Cytoskeleton proteins [BR:
bpec04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
110169606 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_NWD2_C
WD40_like
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_VPS8
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
110169606
NCBI-ProteinID:
XP_020790822
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MEDVMRLVSTGDCVKIWDAVSMATLEQFNPHSSSHPIAQACWSSNNQYLVSASSIGDKLV
VSSLKSSPVPVVELAEGKKQTRVCLSSSSQFVVSGGLDCCIHIWDLKTKRLHRTLEDHKE
EVTCVSFNANDSHIASGSTSGDLILHSLITNVSSKPFGHGSNQPIHDLRLSMLRRSLLGS
VSDSGAVVLWDSNTQKEIHVFESAHKAPGSGLSFSPASELLVVSVGLDKKIVCYDTASKI
VVRSIRVDSPLTAVDFTLDGTGLVVGSTQGKIYQYDLRNSSAPTKVTAAHKTSVTSLRFQ
SGVRQKSSKTSSAKVSSSKKSSSKLSSSNHPEPSPQRELTTVGGAAKDPISREAEGQQTP
QSLPVTEMFNNIGRNSLDIFSPAREDSRTLGVNGDTPLGRTNVTNFEMLSKEGEGQKVRG
RASLDIFSPVREDLHSGSNSFRKTPLGTPVGSSQVGTPLMASAGRYNPLHNTFMTPPPIK
EEELTHNAPDLKESKKFDKGSASSLETEAQTTPTSLTQPTNHSEQPKSTFFTPEANWRRG
DSVQTQLTYGSPVQPETQTTTTAAAAGPALSAAMSSTLTQNIAETASQNGAPFTSLQMHF
IQNMIHETLEDFRDACHKDIINLQVEMVRQFCIQLNEIHNLIENYSVNEALVEEVQKLKE
ENQKLRSNY
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgtgatgcgattggtttcgacgggtgactgtgtgaaaatatgggatgcggtt
tctatggcaacactggagcagttcaacccccacagcagcagccatcccatcgctcaggcc
tgctggagctccaacaatcagtacttggtcagcgccagtagcattggggacaaactggtt
gtgtcaagcctcaaatcatctcctgtcccagtggtggagcttgcagaagggaaaaagcag
actcgggtgtgtcttagctcgtcctcacagtttgtggtgagtggagggctggactgctgc
attcatatctgggatctgaaaaccaaacggctgcatcgcacactggaggatcataaagag
gaggtgacttgtgtttcatttaatgccaatgacagccacattgcatccggctcgaccagt
ggtgacctaatcctgcatagcctcatcacgaatgtctccagcaaaccatttggccatggc
agcaaccagcccatccatgacctgcggctgtccatgctgaggcgctcgttgctaggcagt
gtgtccgacagcggcgcggtggttctgtgggactccaacactcagaaggagatccatgtt
tttgaaagtgctcacaaggctccaggctcgggactgtccttctctccggcctctgagctg
ctggtggtcagtgtgggcctggacaagaagatcgtctgttatgacacagccagtaaaatt
gtggtgcgttccattcgggtggacagtcccctcacagctgtggacttcactttagatggg
accggtttagttgtgggatctactcaaggaaagatctatcagtatgacctgaggaactct
agtgctcccaccaaggtcacagcggcacacaagacctccgtcaccagcctgcgttttcag
agtggcgtcagacaaaagtcgagtaaaaccagctcagctaaggtgagcagcagtaaaaag
tcctcctccaaactgtcgagcagcaatcacccagagccctccccacagagagagctcacc
acagtaggtggcgctgcaaaggaccccatatccagagaagcagaaggacaacagactcca
cagtcgttgcctgtcacagaaatgttcaataacattggtagaaacagtctggacattttc
tctccagctcgagaagattctcggactctgggagtaaatggagacacacctcttggaagg
accaatgtgaccaattttgagatgctttccaaagaaggcgagggccagaaggtcaggggc
cgggcgagtttggacatcttctccccagtgcgagaagatctgcattctggctccaactca
tttcgtaaaacccctttgggaacgcccgtgggctcatcacaggtcgggacccctctgatg
gcatcagctggtcggtacaaccctctgcacaacaccttcatgacgcctccccctatcaaa
gaagaggaactgacccataatgcacctgacctcaaagaatccaagaagtttgacaaaggc
agtgcttcgagtttagagacagaagctcagaccacacccacttccttgacgcaaccgacc
aatcacagcgaacagccaaagtccacctttttcaccccggaggccaattggaggaggggg
gacagcgttcagactcaactcacctatggctcacctgtccaaccagaaactcaaaccaca
accacagctgctgcagcaggccctgctctgtctgctgccatgtcttcaactttgacccaa
aacattgcagaaacggcaagtcaaaatggtgctccattcacttcacttcaaatgcacttt
attcaaaatatgatccatgagacactggaggacttcagagacgcatgccacaaagatatc
atcaaccttcaagtcgagatggttcgtcagttttgtatccaactgaatgaaatccacaat
ttgattgagaactactctgtgaatgaggctttggttgaagaggttcaaaaactcaaggaa
gaaaaccagaaactgcgttccaattactga
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