Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110169948
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Entry
110169948 CDS
T05002
Name
(RefSeq) transcription factor Sox-9-A-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpec03000
]
110169948
Transcription factors [BR:
bpec03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110169948
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
110169948
NCBI-ProteinID:
XP_020791218
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MNLLDPYLKMTEEQEKCHSDAPSPCMSDDSAGSPCPSHSGSDTENTRPVDNHLLMSALDY
KKETDEEKFPVCIRDAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAAR
RKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRK
SVKNGQSDAEDGEQTHISPNAIFKALQQADSPASSMGDVHSPGEHSGQSQGPPTPPTTPK
TDLPSNKADLKREGRPVQEGTSRQLNIDFGAVDIGELSSEVISNMGSFDVDEFDQYLPPH
SHTGVAPAGYTGSYGMGSAAVAQNSAWMNKQQQHTLTNLSGEQQQRTTQIKTEQLSPSHY
SDQQGSPQHVTYGSFNLQHYSSSYPSITRAQYEYSEQGTNSYYSHAAGQGSGLYSTFSYM
SPSQRPMYTPIADSAGVPSVPQNHSPQHWEQPIYTQLSRP
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctcgacccttacctgaagatgacagaggaacaggagaagtgtcactccgat
gctcccagcccctgcatgtctgacgactctgcgggctcaccatgcccgtcccactcgggc
tcggacaccgagaacacccggccagtggacaaccatctcctgatgtccgctctcgactac
aagaaggagacggacgaggaaaagttccccgtgtgcatccgcgatgctgtgtctcaggtg
ctcaagggatacgactggaccctcgtgcccatgcctgtgcgcgtcaacggatccagtaag
aacaagccgcacgtcaagagacccatgaatgccttcatggtgtgggctcaggctgcgcgc
aggaaactggccgatcagtacccgcatcttcacaacgcggagctcagcaagacattgggc
aaactctggagattgctcaacgagtctgagaagcggccgttcgtggaagaagcagaacga
ttgagggtgcagcataagaaggaccaccctgactacaagtaccagccaaggcggagaaag
tctgtcaaaaacggtcagagcgacgctgaagacggcgagcagacgcacatttcaccgaac
gccattttcaaggcactgcagcaggcggattctcctgcgtccagcatgggagatgtgcac
tcccctggcgaacactctggtcagtcccagggtccacccactccacctaccacccccaaa
actgatctgccctccaacaaagctgatctgaagcgggagggccgacccgtgcaggagggc
accagtcgccagctcaacattgactttggtgcagtggacattggggagctgagcagcgag
gtcatctcaaacatgggcagttttgacgtggacgagtttgaccagtaccttccgccccac
agccacacgggcgttgctccggcagggtacactggcagctatggcatgggcagtgcggct
gtggcccagaacagtgcctggatgaacaaacagcagcagcacacactgaccaacctgagc
ggggagcaacaacagaggaccacacagatcaagacagagcagctgagtccgagccactac
agtgaccagcagggctctcctcagcatgtcacctacggctcctttaacctgcagcactac
agcagctcgtacccctccatcaccagagcccagtacgagtactcagagcagggcactaac
tcgtactatagtcatgcggctggccagggctccggcctttactccacgtttagctacatg
agccccagtcagaggcccatgtacaccccaatcgcagacagcgctggggtgccctctgtc
ccacagaaccacagtccacagcactgggagcagcccatctatacacagctctccaggccg
tga
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