Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110170002
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Entry
110170002 CDS
T05002
Symbol
smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110170002 (smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpec03021
]
110170002 (smarcd3)
03036 Chromosome and associated proteins [BR:
bpec03036
]
110170002 (smarcd3)
Transcription machinery [BR:
bpec03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110170002 (smarcd3)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110170002 (smarcd3)
PBAF complex
110170002 (smarcd3)
GBAF(ncBAF) complex
110170002 (smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
S5p_N
Motif
Other DBs
NCBI-GeneID:
110170002
NCBI-ProteinID:
XP_020791277
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MATEDTAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPTVRPGL
PSPVMEPSRKRPAPSQQVQQQQQTQQQQQQAVQNRARNAKRRKMADKILPQRIRELVPES
QAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPARPDADDSDGSI
ASWELRVEGKLLDDPGKQKKKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQ
VKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDS
HDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHVIREQQTPNPKWIVTD
VDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEIASLDNKIHETIESINQLKIQR
DFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRAAFYHEPWSQEAVSRYFYCK
IQQRRQELEQALAVRNT
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggacacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcttggtccatggagtgcgtcctggcatgccgtctggagcaaggatgccccaccaggga
gcacccatgggcccccccggccccccgtacggtggcagcccgacagtgcggcccggcctg
ccctcccctgtgatggagcccagccgaaagaggcctgccccctcccaacaggtccaacaa
cagcagcagacacagcagcaacagcagcaggctgtgcagaaccgagccagaaatgctaag
agaaggaaaatggcagacaagattcttccgcaaaggatccgtgagctggtccctgagtcg
caggcgtacatggaccttctggcctttgagcgtaaactggaccagaccatcatgcgcaaa
cgcgtggacatccaggaggccctcaagaggcccatgaagcaaaagcgcaaactaaggctg
tacatatcaaacaccttcaaccccgccaggcctgacgccgatgactctgatggaagcatt
gcatcatgggaactgcgagtggaagggaaactgcttgatgatcctgggaagcaaaagaag
aagttttcctccttcttcaagagcctggtcatcgagctggacaaagacttgtatggtcct
gacaaccatctcgtggagtggcaccgcacgcccaccacccaggagacggacggcttccag
gtgaaacggcccggagacgtgagcgtacgctgcactctgctactcatgcttgactaccag
cccccacagtttaaactggacccccgcctggcccgcctgcttgggatccacacacagaca
cgctcctgtatcatccaggccctctggcaatacgtcaagaccaacaagctgcaagactcc
catgacaaggagtacatcaactgtgacaagtacttccaacagatttttgattgtccccga
ctgaaattctctgaaatcccccaacgtctaaccaacctcttgttacctccagaccctatt
gttatcaaccatgttatcagagagcaacagacacctaatccaaaatggatagtgacagat
gtggaccccaatgatcagaagaagacggcatgttatgacattgatgtggaagtggaggac
cctctgaagagtcagatgagcagcttcctcctgtccactgccaaccagcaggagatcgcc
tccctcgacaacaagattcatgagaccatcgagtccatcaaccagctgaagatccagagg
gacttcatgcttagtttctccagagatcccaagggctacatccaagactggctcaaatcc
caaagcagggaccttaagttgatgacagatgtggtggggaacccagaggaggagcgcagg
gcggcgttctaccacgaaccctggtcccaagaggccgtcagccgctatttctactgcaag
atccagcagaggaggcaggagctggaacaggccttggcggtccgcaacacctaa
DBGET
integrated database retrieval system
