Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110170046
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Entry
110170046 CDS
T05002
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bpec04040
]
110170046 (trpc1)
Ion channels [BR:
bpec04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110170046 (trpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
110170046
NCBI-ProteinID:
XP_020791328
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MHISICPYSLSVVMAALYQGADASSPDKFLALKDVREVKEETTLDEKLYLLACEKGDYYM
VKKLLEENRHGELNINCVDVLGRDAVTIAIENENLDILQLLLDHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSEDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKIATVLSVTVLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYLTFLLLLNLYSLVYNEGMKNTMGPALEM
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALRIVAHSKFKN
VADKERKSWDAFHPILVAEGLFAFANVLSYLRLFYMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGMTQLYGTEMKDREKNPPKDCEGIFCEQQSNDAFHSFMGTCYALFWY
IFSLAHVALFVTRISYTEELRSFVGAMIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHED
KEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTVCYFVTSLRKWICSHTSKGKVKRQNSL
KEVRNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRD
LLGFRTSKYAMFYPRS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtatttgtccgtattcgctttccgtcgtaatggcagctttataccaaggc
gcagacgcttcctctccggataaatttctggccctaaaggacgtgagggaggtgaaggag
gaaacaacactggacgagaagctctatctcctggcatgtgagaaaggtgactactacatg
gtgaagaagttacttgaggagaacagacatggcgagctcaacattaactgtgtggatgtt
ttgggtagagatgcagtcactattgctattgaaaatgagaacttggacatactgcagctg
ctgttagaccacggttgccaggctacagatgctttgctggttgccatagattctgaggtg
gttggagcagtggacattcttcttaatcacaggcccagacgatcatctaaaccatcaatt
gcgaaactgatgcagcgtatccaaaacccggagtattcgaccactatggatgtggctccg
gtcatcctggcagctcacaggaacaactatgagatcctgaccatgctgctcaaacaggac
atctctctgcccaggccccatgctgtgggctgtgagtgcaccctctgcaacgccaaaaac
aagaaggacagtttacgtcactccaggttccgcctggacatttaccgctgcctggccagt
ccatctctcatcatgctgactgaagaggatcccattttgagagcgtttgaactcagtgct
gatctgaaggagctgagtctggtggaagtggagtttaggaacgactatgaggagctggca
aagcagtgtaagatgtttgccaaggatctgctggctcaggcccgcaactcccgagaactg
gaagtcattctcaatcacacctctagcgaagatcacgtggacaagagaggcctgctggag
gagaggatgaacctgagccgcctcaaactcgccatcaagtacaatcagaaagagtttgtg
gcccagtctaattgccagcagttcctgaacacagtgtggtttggggagacggccagttat
cgtcgtaagcacacctgtctgaagatcgccacggtgttgagtgtaactgttctatggccc
ctcctctccgtgtgctacctcctcgtgccgcgatcacgtgtgggccagatcatacacacg
ccatttgtcaagttcatcatccacagcgcctcctacctgaccttcctgttactgctcaac
ctctactcactggtctacaacgaaggcatgaagaacactatgggccccgcgctggagatg
atcgactacctgctcatactctggatcatagggatggtgtggtcggatgtgaagcgcttg
tggtacgaggggctggaggattttctggaagaatctaggaaccagttgagctttgtcatg
aattccctttacctcgcgacctttgccctcaggattgtggcccacagcaagttcaagaat
gtggcagacaaggagaggaagagctgggatgccttccaccccatcctggtggccgagggt
ctgtttgccttcgctaatgttctcagctacctgcgactattctacatgtacaccaccagc
tccatactggggccgctacagatctctatgggccagatgctgcaggagtttgggaagttc
ctgggcctctttctattggtgctgttttcttttaccattggaatgacccagctgtacggc
accgagatgaaagacagagagaagaacccacccaaagactgcgagggcatcttctgtgaa
cagcagagcaacgatgccttccactcgtttatggggacatgctacgctttgttctggtac
attttctctttggcccatgttgcactcttcgtcactcggatcagttacaccgaggagctg
cgttcctttgtaggggccatgatcatcggcacttacaacattgtggtggtaatcgtcttg
accaaactgctggtcgccatgctgcacaagagcttccggcaaatagctaatcacgaggat
aaggagtggaagtttgccagagccaagctgtggctaagctactttgatgacaagtgcacc
ctgcctccaccgttcaacatcatcccctctcccaaaaccgtgtgctactttgtgaccagt
ttgagaaagtggatctgttcacatacgtctaagggcaaagtcaaaagacagaacagcctc
aaggaagtgaggaacctaaagcagaagcgtgatgagaactaccagaagatcatgtgctgc
ttggttcaccgctacttaacctcaacgcgtcagaagatgcagagcacagatcaggccaca
gtggaaaacctcaatgatttgcgacaagatctgtccaagtttcgcaacgagatgagagac
ctgcttggcttcaggacatccaaatatgccatgttctatcccaggagctaa
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