Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110170071
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Entry
110170071 CDS
T05002
Symbol
sox17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110170071 (sox17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpec03000
]
110170071 (sox17)
Transcription factors [BR:
bpec03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110170071 (sox17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
110170071
NCBI-ProteinID:
XP_020791353
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MSSPDAGYASDDQTQARCAMSVMMPGMGHCQWADPLSPLGDAKVKSETCAAASSTHNRGK
SEPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPVTEKQPFVEEAER
LRVQHMQDHPNYKYRPRRRKQVKRIKRLDSGFLVHGPPEHQGLSGDGRVCVEALGLGYHE
HNFQLPPQPMGHYRDAQAYESYSLPTPDTSPLDAVEPDSMFFPPHSQEDCHMMPYPYHTQ
GPEYQPQEPLSTHHPNLNFSRHSSGQEQPPQPPAPPTLPPSYMGCPNPLTMYYNQPSHHK
RHPAAGQLSPPPDPHSAETVEHMPHSELLSEVDRSEFEQYLSSSGVAARADMTGLPYAPH
DSGMQGPESLTSSVLSDATTAVYYCSYNNS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcccgatgcggggtacgccagcgacgatcaaacccaggcaaggtgtgcgatg
tcagtcatgatgcctggaatgggacactgtcagtgggctgatcctctcagtcctctcggg
gacgccaaagtaaaaagcgagacgtgcgcggctgcctcgagcactcacaaccgagggaag
agcgagcctcggatccggaggcctatgaacgcgtttatggtctgggccaaggatgagcgg
aagagattggcgcagcaaaacccagacctgcacaacgcggagctcagcaaaatgttgggg
aagtcgtggaaggcccttcctgtgacagagaagcagccgtttgtggaggaggccgagcgc
ctgcgggtgcagcacatgcaggatcaccccaactacaagtacaggccacgcaggcggaaa
caggtcaagaggattaagaggctggactcaggcttcctggtgcatgggcccccagagcac
cagggcctgtcaggggacggcagggtgtgtgtggaggcgctcggcctgggctaccatgag
cacaacttccagcttccccctcaacccatgggtcactaccgggacgctcaggcttacgag
agctacagtctccccacaccggacacatctccactggacgctgtggagcctgactccatg
ttcttccctccacactctcaagaggactgccacatgatgccatacccctaccacacgcaa
gggcctgagtaccagccacaggagcctctctcaacccaccacccaaacctcaatttctcc
cggcactcctcaggtcaggagcagcctccacagccccctgcacccccgacccttccccct
tcttacatgggatgccccaaccctttaaccatgtattacaatcagcccagccaccataag
cggcacccagcagcagggcagctctccccccctccagatccccactcagctgagacagtg
gagcacatgccccactccgagctgctgtcggaggtggaccgcagtgagtttgagcagtac
ttgagctcgtctggggtggcagcgcgtgcagacatgacaggcctcccctacgcgccacac
gactctggaatgcaaggaccagagagcctcacatcatcagtgctgtcagacgccaccaca
gctgtgtattactgtagctacaacaactcctaa
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