KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110170404
Entry
110170404         CDS       T05002                                 
Symbol
wdr48
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    110170404 (wdr48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpec03400]
    110170404 (wdr48)
DNA repair and recombination proteins [BR:bpec03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     110170404 (wdr48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 WDR54 Beta-prop_IP5PC_F Beta-prop_NUP159_NUP214 RAWUL WD40_like Tfb2_C
Other DBs
NCBI-GeneID: 110170404
NCBI-ProteinID: XP_020791709
LinkDB
Position
Unknown
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVY
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLSMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDKKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVSTTKSSVNKWSLKGMHNFRSSGEYDNDCSTPLTPLCTQPEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAFWDVLKACKGEDLGKVEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQALLEFWPRTRIN
PMDEEENEVNHVNGEQENRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSTNDKPGEQEKEEDMAMLAEEKIELMCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggccacgcatcacaggcaaaatgctgctgggcggagaaaagtgcaggtgtcctatgtt
attagagatgaggtggagaagtacaatagaaatggggtgaatgcacttcaattggaccca
gctctaaaccggctattcacagctggacgagactccatcatccggatatggagcgtttat
cagcacaaacaagatccatacatagcttcaatggagcatcatacagactgggtcaatgac
atagtactgtgttgcaatgggaaaacattaatatctgcctcatcagacactactgttaaa
gtatggaacgcacacaaaggtttttgtatgtcaacgttacgaacacacaaggactatgtg
aaagccctggcatacgctaaagataaagagctagtggcgtcggcaggcctggaccggcag
atcttcctgtgggacgtgaatacactaacagcacttactgcttccaacaacactgtcacc
acttcctcactcagtggaaacaaagactccatctatagtctgtctatgaaccagatgggc
acagttatagtatctggatccacagaaaaggtactcagagtctgggacccacgaacatgt
gcaaaactgatgaagctaaaaggtcacacagacaatgttaaatccttgctgctaaaccgt
gacggcactcagtgtttgtcaggtagttctgatgggactattcgactgtggtcccttggt
cagcagcggtgtatcgccacataccgggtccacgacgaaggtgtctgggctctgcaagtg
aatgaagcattcacacatgtgtattcaggtggcagggacaaaaagatttactgcactgat
ttacgtaacccggacatcagagtgttaatctgtgaagaaaaggctcctgtgctcaaaatg
gaactggacagatctgctgacccaccgcctgcaatctgggtctccaccaccaagtcatcc
gttaataaatggtctttaaagggaatgcacaacttcaggtcatcaggggagtatgacaat
gattgcagtacacctctgacaccactttgtacacagccagaacaagtcattaaaggaggt
gccagtattatccagtgccacattttgaatgacaagagacacatactcaccaaagatacc
aacaacaatgtggcattctgggatgtcctaaaggcttgcaaaggagaagatttaggtaaa
gtagaatttgacgaagagattaaaaaacgcttcaagatggtgtatgtgccaaactggttc
tctgttgatctgaaaactgggatgcttactatcaccctggacgaaagtgactgctttgct
gcctgggtatcggcaaaagatgctggtttttcaagctctgatggatctgacccaaagttg
aatctgggaggattattgcttcaggccctgctggagttctggcccaggactcgtataaac
ccaatggatgaggaggagaatgaagttaaccatgtgaatggtgagcaggagaacaggatc
cagaaaggaaatggatactttcaggtgccaccacacacgccagttatctttggagaggcc
ggaggcaggactctatttagattgctatgtagagattcaggaggagagactgaatcaatg
ctgcttaatgagacagtccctcagtgggttattgacataactgtagataaaaatatgccc
aaattcaacaaaattccattctacctccaaccccattcatcttctggtgcaaaaactcta
aaaaaggaccggctatcagccagtgacatgcttcaggtgcggaaggtgatggagcacgtc
tatgagaaaattatcaatctggacaatgagtcccagaccaccagctcctcgaccaacgat
aagcctggtgagcaggagaaagaggaggacatggctatgcttgcggaggagaaaatcgaa
ctcatgtgtcaagaccaggttctggatcccaacatggacctgcgaacagtaaaacatttt
atctggaagagtggaggggacttgactctacactataggcagaagtccacgtga

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