KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110170514
Entry
110170514         CDS       T05002                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03420  Nucleotide excision repair
bpec04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110170514
  09124 Replication and repair
   03420 Nucleotide excision repair
    110170514
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bpec04121]
    110170514
   03400 DNA repair and recombination proteins [BR:bpec03400]
    110170514
Ubiquitin system [BR:bpec04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     110170514
DNA repair and recombination proteins [BR:bpec03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      110170514
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      110170514
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd KduI
Other DBs
NCBI-GeneID: 110170514
NCBI-ProteinID: XP_020791828
LinkDB
Position
Unknown
AA seq 590 aa
MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPEPHIIFNGESKDLLFILTSKYNACILEYKQNGDSIDIITRAHGNVQDRIGR
PSETGIIGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVQFLYGCP
APTVCFIYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQ
ESITYHNGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGT
VALKDLHVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSFVTVMETFT
NLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLR
SEAGRETDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHQQLIQITSG
SVRLVLQDSKALVSEWKEPQGRNISVAACNHTQVVLAVGRALYYLQILAGELKQISTTEM
EHEVACLDITPLGEPGSESPLCAVGLWTDISARVLKLPCFTALHKEMLGG
NT seq 1771 nt   +upstreamnt  +downstreamnt
atgtcctataactacgtggtgacggcgcagaagcccacggccgtgaatgcctgtatcacc
ggtcacttcacgtctgcagaggatttaaacctgctcatagccaaaaacactcgtctggag
atctatgtggtaacagcagaggggctgcggcccgtcaaagaggtgggcatgtacggaaag
atcgcagttatggaactcttcaggccagagccacacatcatttttaatggtgagagcaaa
gacctgctgttcatcttgacgtccaagtataacgcctgcattctggagtacaaacaaaat
ggagacagcattgacataatcacacgcgcccacgggaatgtacaggatcgtattggccgt
ccctcagagacaggcatcattgggatagtggacccagagtgtaggatgattggtctgcgt
ctgtacgacggcctgtttaaagtcatccctctggaccgcgacaacagagaactcaaagcc
ttcaacatcagactggaggagctccaggtgatcgatgtgcagttcctgtacggatgcccc
gcccccaccgtctgcttcatctaccaggatccacagggacgtcacgtcaaaacctatgag
gtctcactgagggagaaggagttcaacaaaggaccctggaaacaggagaatgtggaggcc
gaggcttctatggtcatcccagtgccagagccatttggaggcgctataatcataggacaa
gagtctatcacataccacaatggagacaagtacttggccattgctccacccaccatcaag
caaagcactatcgtgtgtcacaaccgtgtggaccccaacggctcacgctacctgctggga
gacatggagggccgtctcttcatgctgctgctggagaaggaggagctgatggatgggact
gtggctcttaaagacctgcacgtggagctgctcggagagacgtccatcgcagagtgcctg
acgtacctagacaacggggtggtgtttgtcggctctagactgggcgactctcagctagtc
aagctgaacgtggacagtaatgatcagggctcgtttgtcaccgtcatggagaccttcacc
aacctggggcccattgtggacatgtgcgtggtggacctggagagacaaggccagggacag
ctggtgacgtgctccggcgcattcaaagagggctctctccgcatcatccgcaacggcatt
gggattcacgaacacgccagcatcgacctgcccggaattaaaggtttgtggccgctgcgc
tcggaggcgggcagggagacggacgacatgctggtgctgtcctttgtgggccagacgcga
gtcctgatgctgagtggggaggaggtggaggagacagagctgccgggcttcgtggacaac
cagcagaccttttactgcggcaatgtggcgcaccagcaactcattcagatcacgtcaggt
tcggtgcgactggtgctccaggacagtaaggccctggtgagtgaatggaaggagccccag
gggaggaacatcagcgtggctgcctgtaaccacacacaggtggtgctcgccgtgggacgg
gcgctctattacctgcagattctagccggggagctcaaacagatcagcaccacggagatg
gagcatgaggtggcctgcctggacatcactcctctgggggagccgggcagtgagtcgccc
ctgtgcgccgtgggactgtggacagacatatccgcgcgcgtgctcaagctgccttgcttc
accgccctgcacaaggagatgctgggaggag

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