Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110170604
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Entry
110170604 CDS
T05002
Symbol
sox1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpec03000
]
110170604 (sox1)
Transcription factors [BR:
bpec03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110170604 (sox1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
ZrgA
Motif
Other DBs
NCBI-GeneID:
110170604
NCBI-ProteinID:
XP_020791936
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTNTGQTGPNASSKASQERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLSGPGAGVGMSSSGVGQRLESPGGHAGSGSSYAHVNGWANGAYSGQVAAAAAA
AAMMQEAQLAYSQHPGSGAHHHHHHAHSHHHHAHNPQPMHRYDMSALQYSPISNSQSYMS
ASPSGYGSITYSAQHQSSSAMGALGSLVKSEPSVSPPVSSAHTRGPCPGDLREMISMYLP
GSEPGDASMQSRLHALPQHYQSAAAGVNGTVPLTHI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaacggacctccactcccctggtccccaaacaaatacaaac
actggacaaacggggccgaacgctagctcgaaagcgagccaggagcgcgtaaagagacca
atgaatgcgttcatggtttggtcccgtggccaacgccgaaagatggcccaagagaacccc
aaaatgcacaattctgagatcagcaagcggctaggtgcggagtggaaagtgatgtccgag
gccgagaagcgtccgttcattgacgaggccaagcggctgcgggccatgcacatgaaggag
cacccggactataagtaccggccgcgaaggaagaccaagactctgctaaagaaggacaag
tactccctggctggtggactgctgtctgggcccggtgctggggtcggcatgtcctcatca
ggagttggccagaggttagagagtccaggggggcacgccggctctgggtcaagctacgcg
catgtgaatggctgggcaaatggtgcgtactcgggacaggtggctgccgctgcggctgcc
gctgcaatgatgcaggaagcgcagctcgcttatagccagcacccagggagcggtgcacac
caccatcaccaccacgcgcactcccatcaccaccacgcgcacaacccgcagcccatgcac
cgctatgacatgagcgcgctccagtatagccccatctcgaactctcaaagctacatgagc
gcctccccgtctggttatggcagcatcacatacagcgctcagcaccagtcctcctctgca
atgggcgcactgggttctctggtcaagtccgaaccgagcgtgagtcccccagtgagcagc
gcgcacactcgtggtccttgtcctggagacttgagggagatgataagtatgtacctgccc
gggagtgaacccggtgatgcgtccatgcaaagcagactgcacgcgctcccgcagcactac
cagagcgccgcggcgggagtgaacgggacggtgcctctaacacatatttaa
DBGET
integrated database retrieval system
