Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110170645
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Entry
110170645 CDS
T05002
Symbol
col8a1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
110170645
NCBI-ProteinID:
XP_020791982
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Position
Unknown
AA seq
735 aa
AA seq
DB search
MTPLPAPLLLSLQLAVFTCVNGAFYKQHPQQYQPVQQYQQHMGMGKEGFPQQQYMGKEMP
YMQYPHYRKEMPQMPVKGKGPRNGGAINGGQDKGQTIPSGAEGVPQGEPGPMGPPGPEGP
PGPPGPSGNGLPGPEGRPGPPGPPGLPGLGKPGSQGLPGRPGADGEPGMQGEMGPRGEMG
PGGQQGPQGPPGPPGLPGIGKTGVPGLPGQPGPKGDPGHKGFPGLPGLPGPKGDKGIGMP
GQPGHKGLPGPAGPAGPRGLPGFGKPGLHGAPGPKGPPGDKGHPGLQGPAGPPGEAGAPG
PQGLAGVGKPGPNGLPGQPGTPGAKGHAGPPGLPGKPGLPGFGKPGLPGPKGDKGMNGPP
GLVGPKGDKGLAGPPGMTGLPGPKGSTGLSGPMGPSGGLGAPGPKGECGEGGPKGLDGAK
GDIGPPGLAGRNGLPGDRGEPGPRGPPGPAGAKGESGHKGLPGQPGPQGLPGTNGLDGLP
GEIGPQGPKGIPGLDGATGPTGPPGVSGPKGESGPPGPPGLVGEGSPGHPGPIGPPGKEG
PVGPQGQPGLPGPPGPPGEPGLAPDMSGVLSEMGPGLDGVKAGGYGKKGKFGTNGAEVMG
SSGLEMPAFTAILTTPFPPVGSPIVFDRLLYNGRQNYNSQTGIFTCELPGIYYFAYHVQC
KGANVWVSLMRNNEPVMYTYDEYKKGFLDQASGSAVLPLQPGDTVYLQLPSDQAAGLYAG
QYVHSSFSGYLLYPM
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgactcccctccctgcccccctcctcctgtccctgcagctggcagtcttcacgtgtgtt
aatggggcgttctacaagcaacatcctcaacaataccagccagtgcaacagtaccaacaa
catatgggcatgggcaaggagggcttccctcagcaacagtacatgggcaaagagatgcca
tacatgcagtacccgcactatcggaaggagatgccacagatgccagtgaaaggcaaaggt
cctcgaaatgggggtgctattaatggtggccaggacaaaggtcagaccattcccagtggt
gctgaaggagttcctcagggtgaaccagggccaatggggcccccaggaccagaggggcct
ccaggtcctcctgggccttcgggcaatggactaccaggacctgagggaagaccaggacca
cctggtccaccaggattacctggactgggaaaacctggatcgcagggactaccaggcaga
cctggagcagatggagagcccggaatgcaaggtgaaatgggccctaggggagagatggga
ccaggtggacagcaaggaccccaaggcccaccaggaccacctgggctaccaggaataggt
aaaactggtgtaccaggactaccaggccagccgggcccgaaaggtgatccaggacacaaa
ggatttccaggcttaccaggtttaccaggacccaaaggagacaaaggaataggtatgcca
ggacagccaggtcataaaggacttccagggcctgcaggaccagcgggaccaagaggactt
cctggttttggaaaacctgggctacatggagcacctggtccaaaaggtccaccaggagat
aaaggacatccaggactgcaaggaccagccgggccaccaggagaggctggagctccaggc
ccacaaggtttagccggtgtaggaaagccaggtccaaatggccttcctggacaaccaggt
actccaggtgctaaaggtcacgcaggacctccaggtctaccaggaaagccaggattacct
ggatttggtaagcctggactcccaggaccaaaaggtgataaaggtatgaatggtccacca
gggctggtgggaccaaaaggagataaaggccttgcaggacctcctggtatgactgggctt
ccaggaccaaagggttcaacaggtctttcaggccctatgggcccatctggaggtttaggt
gcacctggaccaaaaggggaatgtggagaaggtggacctaaaggtctcgatggagccaag
ggagatattggaccccctggcttagctggtagaaatggacttccaggggatcgtggagaa
ccaggacctagaggcccaccaggaccagcaggtgcgaaaggagagagtggacacaaaggt
cttcctggtcagcctggtcctcaagggcttccaggaactaatggactggatggtttgcct
ggtgagattggacctcaaggtcctaaaggaattccaggattagatggtgcaacagggcca
actggacctcctggtgtttccggtcctaaaggagagagtggcccacctgggccaccaggt
cttgtaggtgagggaagtcctggtcaccctggcccaattggtccccctggaaaagaaggt
ccagttggaccccaaggtcaaccaggtctgcctggcccaccaggtccacctggagaacct
ggattagcacctgacatgtctggagtactctctgagatgggacctggacttgatggcgtg
aaggctggaggttatggcaagaagggcaagtttggtaccaatggtgcagaggttatggga
tctagtggattggaaatgccagcattcactgcaattctaacgacaccttttccaccagtt
ggcagtccaattgtctttgataggcttttgtacaatggacggcaaaactataattcgcaa
actggaattttcacctgtgagttaccagggatttattactttgcctaccatgttcagtgc
aaaggagccaatgtgtgggtgtccctgatgaggaacaatgaaccagtaatgtatacatac
gatgaatataaaaagggttttctggatcaagcatctggaagtgcagtactacctctccaa
ccaggggacactgtatatctacaactgccttcagatcaggctgcaggactttatgcaggg
caatatgtgcactcatcattttctgggtatttgttatatcctatgtaa
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