Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110170659
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Entry
110170659 CDS
T05002
Name
(RefSeq) regulator of nonsense transcripts 3A-like
KO
K14328
regulator of nonsense transcripts 3
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03013
Nucleocytoplasmic transport
bpec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110170659
03015 mRNA surveillance pathway
110170659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110170659
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110170659
mRNA cycle factors
P-body specific factors
110170659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
DUF6980
RRM_1
Motif
Other DBs
NCBI-GeneID:
110170659
NCBI-ProteinID:
XP_020792000
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MRSEKDQMTVAKEKSTVEIQFRDIPSEQDNTSGNAKQKEEKKEVFTKVVIRRLPPSISKD
QLEEQLSPLPSFDYFEFFPADQSLYPHLFSRAYINFKNPEDILHFRDRFDGYVFIDNKGL
EYPAVVEFAPFQKISKKKLKKKDAKAGSIEEDPEYKRFLENYSCDEEKSMANPETLLGEI
EAKTKELIAKRTTPLLEYIKNKKIEKQRIREEKREERRRREMEKKRQREEEKRKRREEER
RKRKEAEKQKKLSEKDIKIKLLKKSDRDDDVDSDRMKDKSDVGETDRPNKWEKSGNQMKS
KEFKEKGQAESDKEQQQHSRRQREKDHRVKDEERKRQRHHYEFDKFMRRKEETKWGKGYC
QDREERRKKEGHHHSYNYCPDNGEKLGKEDRDELSNRKERLRNKVSEKDRPAMQLYQPGA
RNRKRMSSSGKSYECIPVGHSPEPAADYAYEMANMSLDKGFEKGKDEQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaaaaagaccaaatgaccgtggccaaggagaagagcactgtggagatccaa
tttagagacatcccgagtgagcaggacaataccagtggaaacgccaagcagaaagaagag
aagaaagaggttttcaccaaggtggtgattcgcaggcttcctccgagcatctccaaggat
caacttgaagaacagctcagtccactaccctcatttgattattttgaattttttccagct
gatcaaagcttgtacccacatctgttttctcgggcatatattaattttaaaaaccctgaa
gatattctgcacttcagagacagatttgatggatatgtcttcattgataacaagggcctt
gagtacccagcagtggtggaatttgctcccttccaaaaaatttcgaagaagaaactaaag
aaaaaggatgctaaagctggaagcattgaagaagatccagagtataagcgatttttagag
aattactcctgtgatgaggagaaatcaatggccaatcctgagactctgttgggggaaatt
gaagccaaaactaaggagctcattgccaaacggactacacccctcttagagtacatcaaa
aataagaaaattgagaaacaaagaataagagaggaaaagagagaggaaagacggagacgt
gaaatggagaaaaaacgccaaagagaggaagagaaaaggaagaggcgagaggaagaaaga
cgcaaacgcaaagaggcagaaaagcaaaagaaactgtctgagaaggacatcaaaattaag
cttttaaagaagagcgatagagatgatgatgtggattcagatcgaatgaaggacaaaagt
gatgtgggagagacggaccgaccaaacaagtgggaaaagagtgggaatcaaatgaagtca
aaggaatttaaagaaaagggtcaggcagaaagtgacaaagagcagcagcagcacagtcgc
aggcagagagagaaggaccacagggtgaaagatgaggagagaaaacgccaaagacaccat
tatgagtttgacaagtttatgcgccgtaaagaggagaccaaatggggaaaaggctactgc
caggacagagaggagaggaggaagaaagaggggcaccatcacagctataactactgtcct
gacaatggagaaaaactgggcaaagaggaccgcgatgagttgagtaacagaaaggagcgc
cttcgaaacaaggtgagcgagaaggatcgtccagcaatgcagctatatcagcctggtgca
cgaaatcgaaaacgcatgagctcatcgggtaaaagctacgagtgcatcccagtgggtcac
tcacctgaacctgcagctgactacgcctatgagatggccaacatgagcttggacaaaggt
tttgaaaagggcaaagatgaacaataa
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