Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110170663
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Entry
110170663 CDS
T05002
Symbol
sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110170663 (sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpec03041
]
110170663 (sf3b1)
03036 Chromosome and associated proteins [BR:
bpec03036
]
110170663 (sf3b1)
Spliceosome [BR:
bpec03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110170663 (sf3b1)
Complex B
110170663 (sf3b1)
Complex C
U2 SnRNP specific factors
110170663 (sf3b1)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110170663 (sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
GST_N_4
DUF2298
Motif
Other DBs
NCBI-GeneID:
110170663
NCBI-ProteinID:
XP_020792005
LinkDB
All DBs
Position
Unknown
AA seq
1315 aa
AA seq
DB search
MAKIAKTHEDIEAQILEIQGRKAALVEEGADNGVGLDSTGFYDQEIYGGSDSRFAGYVTS
IAANEQEEDDEDDTTTSLLGPKKPGYHAPVAILNAIPQSDEQYDPFAEHRPQKIADREDD
YKTRRMMMIISPERLDPFADGGKTPDPKMQVRSYVDVMREQNLSKEEREIRQQLAEKAKS
GELKAVNGSAASQAAAKRKRRWDQTADQTPSNATPKKLSSWDQADASAETPGHTPAHTPS
NSRWDETPGRPKGSETPGATPSTRMWDPTPSHTPAGAATPGRDTPGHATPGHGGATGSVR
KNRWDETPKTERETPGHGSGWAETPRTDRGEDSVGETPTPGASKRKSRWDETPASQMGSS
TPLLTPGKTPIGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTDDELDAMFP
EGYKVLPPPAGYVPIRTPARKLAATPTPIGGMTGFHMQVEDRTTKQMNDQPSGNLPFLKP
DDIQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAG
PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYA
RVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLK
AVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAI
AALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREV
MLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRN
YRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGATDIDHKLE
EQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQ
QAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKM
TPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAH
KKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVL
PALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAS
AVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQY
CLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPQIYNDEKNMYVRYELEYVF
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaaaactcacgaagacatagaggctcagatcctcgagatccagggg
cggaaggctgccctggtagaggaaggagcagacaatggggtcggcctcgattctactgga
ttttatgatcaggagatctacggtggcagcgacagtcggtttgctggatatgtcacatct
atcgctgccaatgagcaagaggaagatgacgaagacgacacaacaacaagtttgttggga
ccgaagaaaccaggctatcatgcaccagtggccattcttaatgccatcccacagtcagat
gagcagtatgacccctttgctgagcatcgaccacagaaaatagctgatcgagaagatgat
tacaaaaccaggcgcatgatgatgatcatctcccctgagcgtctcgacccctttgctgac
gggggcaaaacaccggatcccaagatgcaggtcaggtcttatgtggacgtcatgagggaa
cagaatctgtctaaggaagagagagaaatccgtcagcagttggcagagaaggccaaatca
ggagaactgaaagctgtgaatgggtccgccgcctcccaagccgccgcaaaacgcaagcgc
cgatgggaccagacagctgatcagactccatccaatgcaactcccaaaaaactttccagt
tgggaccaggctgatgcctctgctgagacaccgggccatacccctgcccacaccccttca
aacagcagatgggatgaaactccaggtcggccaaagggcagcgagacccctggagccacc
cccagtacacgcatgtgggaccccactcccagccacactccagctggcgccgccactcct
ggcagagacacaccaggccatgccacgccagggcatggaggagccacaggaagtgtccgc
aaaaaccgctgggatgaaactccaaaaacagaaagggagacccctggacacggcagtggc
tgggctgaaactccacgcacagacagaggagaagattctgtgggcgagaccccaactccg
ggggccagtaagcggaagtctcgctgggacgaaactcctgctagtcagatgggatcgtcc
acgcctttactaacaccaggaaagaccccaataggaacccctgcaatgaacatggctaca
ccaacaccaggtcacttgatgagcatgacgcctgagcagctgcaagcgtggaggtgggag
agggaaattgatgagagaaatcgacctcttacagacgacgaattagatgctatgtttccg
gaaggttataaggtgttgcctccacccgcaggttatgttccaattcgcaccccagcacgt
aaacttgctgccacccccactcccatcgggggcatgactggatttcacatgcaggttgag
gaccgtaccaccaagcaaatgaatgaccagccatcaggaaatctacccttcctcaaacct
gatgacatccagtattttgacaaacttctggtggaggtggatgagtcaacactgagtcca
gaagagcagaaagagaggaagatcatgaaattactattgaaaataaaaaatggaaccccc
ccaatgcgaaaggctgccctgcgtcagatcacagacaaggcacgtgaatttggagcaggc
cctctgttcaatcagattcttccactacttatgtccccaacccttgaagaccaagagcgc
catctcctggttaaagtcattgaccgtattctatacaagcttgatgacttggttcgaccg
tatgttcacaagattttggtggtgattgagcctttactgattgatgaagattattacgcc
agagttgaaggaagagaaatcatctcaaatttggcaaaggctgctgggttggctacaatg
atctccactatgcgtcctgatattgacaacatggatgagtacgtcagaaacacaacagcc
agagcctttgctgtggtggcctctgctctggggatcccctccctgctgcccttcctcaaa
gctgtgtgcaagagtaagaagtcctggcaggccagacacactggcatcaagattgttcag
cagattgccatcctcatgggctgtgccattctgccccatcttcgcagcttggtggagatt
attgagcatggtctggttgatgagcagcaaaaagtcaggaccattagtgctctggctatt
gctgcactcgctgaagcggctacaccgtatggtatcgagtcatttgactctgtccttaaa
cctctctggaagggtatccgacaacacagaggaaagggtctggctgctttcctcaaagcc
attggatacctgattcctttgatggatgctgagtatgccaactactacaccagggaagtg
atgttgatcctcattagagagttccagtctcccgatgaagaaatgaaaaagattgtcctg
aaggtggtgaagcagtgctgtggcactgatggtgtggaggctaattacataaaaacagag
atcctgccccccttcttcaagcacttctggcaacacagaatggctcttgacaggcgtaac
tacagacagctggttgacacaactgttgaactggcaaataaagtgggtgcagcagaaatc
atttctcgcatagtagatgacctgaaggatgaggctgaacagtacagaaagatggtgatg
gagaccattgaaaagattatgggtaatcttggggccacggacattgatcacaagcttgaa
gaacagctgattgatggtatcctgtatgccttccaggaacagacaacagaggattcagtg
atgttgaacggttttggcactgtggtcaatgctctgggaaagagagtaaagccatacctg
ccccagatctgcggtactgtgctttggcgtctcaacaacaaatcggccaaagtccgacag
caagcagcagatctcatttcccgaacagctgtcgtcatgaagacctgtcaggaggaaaag
ctgatgggtcacttgggtgtggtgttgtatgagtacctgggagaagagtatcctgaagta
cttggtagcatcctgggtgctttgaaggctattgtcaatgttatcggtatgcacaagatg
actcctccaatcaaagacttgcttcctcgtttgacccccatcctcaagaacagacatgaa
aaagtgcaggagaactgcattgacctggttggcaggattgcagacaggggtgccgagtat
gtatcagctagagagtggatgaggatctgttttgaattgctggaactgctaaaagcgcac
aaaaaagctatacgtcgagccactgtcaacacatttggttatattgccaaagccattgga
ccccacgatgtgttggcaactttgcttaacaacttaaaggtccaggagcgacagaatcga
gtctgtaccactgtggctattgccattgtagctgaaacctgctcacctttcactgtccta
ccggccctcatgaacgaataccgtgtgccagagctcaatgtccagaatggtgtgctcaag
tcactttccttcctgtttgaatacattggagaaatggggaaagactacatctacgcagtc
acacccttgctagaggacgcactcatggacagagatttggtccatagacagacagccagt
gccgtggttcagcacatgtctcttggcgtctacggttttggctgtgaagactccctcaac
cacttgttgaactacgtttggcccaatgtgtttgaaacttcgcctcacgttatccaggct
gttatgggggctctggagggcctgagggtcgctattggcccatgtcgcatgcttcagtac
tgcttacagggtctgttccatccagccaggaaagtaagggatgtctattggaaaatctat
aattccatctacattgggtcacaagacgccctgatagctcactacccacagatctacaat
gatgaaaagaacatgtacgttcgatacgagctggagtatgtcttctga
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integrated database retrieval system
