Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110171471
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Entry
110171471 CDS
T05002
Symbol
smarca4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110171471 (smarca4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpec03021
]
110171471 (smarca4)
03036 Chromosome and associated proteins [BR:
bpec03036
]
110171471 (smarca4)
Transcription machinery [BR:
bpec03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110171471 (smarca4)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
110171471 (smarca4)
Chromatin remodeling factors
BAF complex
110171471 (smarca4)
PBAF complex
110171471 (smarca4)
GBAF(ncBAF) complex
110171471 (smarca4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
110171471
NCBI-ProteinID:
XP_020792842
LinkDB
All DBs
Position
Unknown
AA seq
1602 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGGPSPGSAHSMMGPSPGPPHPSQGPTGYPQENMHQM
HKPMEPMHDKGMSDDPRYNQMKGMGMRPGAHPGMGPPPSPMDQHSQGYPSPLGGSEHAPS
PVPANGPPSGPMMPGAPSGPGAGPMETNGDPSQAMAQANRSAPTGPAGPAGPGAGQGGAG
GPTPFNQNQLHQLRAQIMAYKMLARSQPLPEHLQMAVQGKRPMPNMPTSAVPGGTPGAGP
AQPQGNYNRPHGMVGPNMAPPGPAGVPPGMPGQPTNGPPKSWPEGPMVNAAAPSSGPQKM
IPPQPTGRPSPAPPSVPPAASPVIPPQTQSPGQPAQPPPMMMKQSRITPIQKPRGLDPVE
ILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMR
RDTSLETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKD
FKEYHRSITAKIQKATKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQK
KDKRLAYLLQQTDEYVANLTELVRAHKAAQALKEKKKKKKKKKPEATEGGTAALGPDGEP
LDETSQMSDLPVKVIHVDSGKILTGVDAPKSGQLETWLEMNPGYEVAPRSDSEDSGSEEE
EEEDEEEPHTSTAPSEEKKKIPDPDSEDVSEVDVRHIIEHAKQDVDDEYGSQSFNKGLQS
YYAVAHAVTEKVEKQSSLMVNGTLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTI
ALVTYLMEYKRINGPFLVIVPLSTLSNWVLEFDKWAPSVVKVSYKGSPGARRAFVPILRS
GKFNVLLTTYEYIIKDKQVLAKLRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRLLLT
GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHK
VLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKG
GTKTLMNTIMQLRKICNHPFMFQHIEESFSEHLGFSNGVVTGPELYRSSGKFELLDRILP
KLRATNHKVLLFCQMTSLMNIMEDYFAFRNFKYLRLDGTTKAEDRGLLLKSFNDPASEYF
VFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV
EEKILAAAKYKLNVDQKVIQAGMFDQKSSGCERRAFLQAILEHEEQDEEEDEVPDDETVN
QMIARSEEEFEQFMRMDLDRRREDARNPKRKPRLMEEDDMPSWILKDDAEVERLTCEEEE
EKMFGRGSRQRKEVDYSDSLTEKQWLKAIEDGNLEDLEEEVRHKKTTRKRKRDRDDCMST
PSSSGRGRDKDDDGKKAKKRGRPPAEKLSPNPPSLTKKMKKIVDAVIKYKDGNGRQLSEV
FIQLPSRKELPEYYELIRKPVDFRKIKERIRSHKYRGLNDLEKDVMLLCQNAQTFNLEGS
LIYEDSIVLQSVFTSVRQKIEKEEESEGEDSEEEEEEMDEGSESESRSVKVKIKLSRKEK
GDKGGKGQKRKSRGSRAKPVVSDDDSEDEQEEDRSGSGSEDD
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccggacccccctatgggagggacccctcggcccggtccctccccgggccca
gggccctctccgggaggcccgtctccaggttcagcccacagcatgatgggacccagtccg
ggacctccacacccctctcagggacccacaggatatcctcaggaaaacatgcaccagatg
cacaagcccatggagcccatgcatgacaaggggatgtctgatgatccccgctataatcag
atgaaaggcatggggatgagaccaggtgcacatcctggtatgggacctccaccaagcccc
atggaccaacattcccagggttacccctcaccactgggtggctcagagcatgcccccagc
cctgtcccagctaatggcccaccttctgggcctatgatgcccggtgctccctctggccct
ggggctggtcccatggagacaaatggggaccccagccaggcaatggctcaggccaaccgc
agcgctcccaccggtccagcgggtcctgctggacctggtgcaggacagggcggtgcaggg
gggcctacacccttcaaccagaaccaactgcaccaactcagggctcaaatcatggcatac
aagatgttagcgcgcagccaacctctcccagagcacctgcaaatggcagtgcagggcaag
agacccatgcctaacatgcccacgtctgctgtgcctggtgggacaccaggagcagggcct
gcacagcctcagggaaactataaccgaccacacggtatggttgggcccaatatggctccc
cctggacctgctggagtacctccgggtatgccaggtcagccaaccaatggacctcctaaa
tcatggcctgaagggcccatggtgaatgctgctgctccttctagcggccctcaaaagatg
attcctccccagcccacaggcagaccctctcctgctccaccttcagtgcctccagccgcc
tctccggtaatacctccacagacccagtcccccggccagcctgcccagcctcctcccatg
atgatgaagcagagccgtatcacccccatccagaagcctcgcgggctggacccagttgag
attcttcaagagcgggaatacaggcttcaggcaagaatagctcatcgtatccaggagctg
gagaacctgcctgggtccctggctggagacctccgcactaaagccaccatagaacttaag
gccctcagactgctcaatttccagagacagttgaggcaagaagtggtggtttgcatgcgc
cgggacacctctttggaaactgccctcaatgccaaggcttacaaacgcagcaaacgccaa
tctttgcgtgaggctcggatcacggagaagctggaaaaacagcagaaaattgaacaagag
cgtaaacgcagacagaagcaccaagaatacctcaatagcatccttcaacatgccaaggac
ttcaaggagtaccatcgttccatcactgccaagatccagaaggccacaaaagctgttgct
acctaccatgccaacactgaacgcgagcagaaaaaagagaatgagcgcattgaaaaggag
agaatgcggaggctgatggctgaagatgaagaaggctaccgtaaacttatcgaccagaag
aaagacaagcgcttggcgtacttgctgcagcaaacagacgagtatgtggcaaacctcaca
gagctggtgcgagctcacaaggctgcacaagcacttaaagaaaagaaaaagaagaagaaa
aagaagaagcctgaagctacggaagggggcactgctgctttgggacctgatggagagcct
ttggatgagaccagccagatgagtgacctccctgtgaaggtgattcatgtggacagtgga
aagattctgactggggtggatgctcccaagtctggtcagctggagacatggctcgagatg
aacccaggatatgaagtagctcctcgatcagacagtgaagacagtgggtcagaggaagag
gaagaagaggatgaagaggagcctcatacctctacagctccatcagaggagaaaaagaag
atcccagacccagacagtgaagacgtgtctgaagttgatgttcgacacatcattgagcac
gccaagcaggacgtggatgatgagtatggcagccagtctttcaacaaagggctgcagtca
tactacgctgtggcccatgctgtcactgagaaggtggagaaacagtcgtctctcatggtc
aatgggacactcaaacaataccagatcaaaggtctggagtggctggtgtctctttacaac
aacaacctcaatggcatcctggccgatgaaatgggcctgggcaagaccatccagaccatt
gcactcgtcacttacctcatggagtacaagcgcatcaatggacccttcctcgtcattgta
cctctgtcaactctatcaaactgggtgctggagtttgataagtgggcgccatcagttgtc
aaagtttcctacaagggctctccaggtgctcgccgtgcctttgttcccattctacgcagt
ggcaagtttaatgtgctgctcactacatacgagtacatcatcaaagacaaacaagtgcta
gctaagcttcggtggaagtacatgattgtggatgagggccatagaatgaagaaccaccac
tgtaaactgactcaggtgttgaacactcactacctggcccctcgccgtctgcttctgact
ggaacgcctctccagaacaagctgcccgagctctgggcccttctcaacttcctactgccc
acaatcttcaagagctgcagcaccttcgagcagtggttcaatgctcccttcgccatgact
ggagagaaggtggatctaaatgaagaggagaccattctgatcatccgtcgtcttcacaaa
gttctcaggcctttcctcttgagaagactcaagaaagaggtggaggcccagctgcctgaa
aaggtggagtatgtaatcaagtgcgacatgtcagctcttcagagggtgttgtacaggcac
atgcaggccaagggagtgctgcttacagatggatcagagaaggataagaagggtaaaggt
ggtacgaagactctgatgaacaccattatgcagttgaggaagatttgtaaccaccccttc
atgttccagcacattgaggaatccttctctgaacatcttggcttctccaatggagttgta
acaggaccggaactataccgctcctctgggaagtttgaactgctggataggatcttgccc
aaactcagggccacgaaccacaaagtgctgcttttctgtcagatgacatccctcatgaac
atcatggaggattactttgccttccgcaacttcaagtacctgcgcttggatggaacgact
aaggcggaggaccgtgggctgctgctgaaatccttcaatgacccagcctctgagtacttt
gtgtttttgctcagtaccagagcaggaggtctggggctcaacctacagtctgctgacact
gtcataatcttcgacagtgactggaaccctcaccaggatttgcaggcccaggacagagca
catcgtattggtcagcagaatgaagtgcgagtgcttcgactgtgcacagtcaacagtgta
gaggagaagattctggcagctgccaagtacaagctgaatgtggaccagaaagtcatccag
gctggcatgttcgaccagaagtcttctgggtgtgagaggagagcttttctacaggccatt
ttagagcatgaagagcaggatgaggaggaggatgaagttcctgatgatgagacagtcaat
cagatgattgccagaagcgaagaggaatttgaacaattcatgcgtatggacctggatcgg
cggcgtgaggatgcacgtaaccctaagaggaagcctcgtctgatggaggaagatgacatg
cctagctggatcctgaaggacgatgctgaggtggagaggctgacctgtgaggaggaggag
gagaagatgtttggacgagggtcacgccaacgtaaggaggtggactacagtgattcgctc
actgagaaacagtggcttaaggccatagaagatggcaacctggaggaccttgaagaagag
gtgcgtcacaaaaagaccacaaggaagcgcaagagggaccgggatgactgcatgtccacc
cccagcagctctggccgggggagggacaaggatgacgatggcaagaaggccaagaaacgt
ggccgccctccagctgagaaactgtcccctaacccaccctctctcacaaagaagatgaag
aagattgtggacgctgtgatcaagtataaggatggtaatggccgacagctaagtgaggtc
ttcatccagcttccctctcgaaaggaactccccgagtactatgagctcatacgcaaacct
gtggacttcagaaagattaaggagaggatccgtagtcacaaatatcgcggcctcaacgac
ctggagaaggatgtaatgctgctgtgtcaaaatgcacaaacatttaacctggagggctct
ctgatctacgaggactccattgtgctgcagtctgtgttcaccagtgtgaggcagaagatc
gagaaggaggaggagagtgaaggagaagacagtgaggaagaggaggaggagatggatgaa
ggctcagagtctgaatctcgatcggtgaaggtgaagattaaactgagccggaaagagaaa
ggtgacaaagggggcaaaggtcaaaagaggaaaagccgagggtctcgggccaaacctgtg
gtgagcgatgacgacagcgaggatgagcaagaggaggatcgctctggcagcggcagtgag
gacgactga
DBGET
integrated database retrieval system
