KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110171744
Entry
110171744         CDS       T05002                                 
Symbol
rad23a
Name
(RefSeq) UV excision repair protein RAD23 homolog A
  KO
K10839  UV excision repair protein RAD23
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03420  Nucleotide excision repair
bpec04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110171744 (rad23a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110171744 (rad23a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:bpec03051]
    110171744 (rad23a)
   03400 DNA repair and recombination proteins [BR:bpec03400]
    110171744 (rad23a)
Proteasome [BR:bpec03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    110171744 (rad23a)
DNA repair and recombination proteins [BR:bpec03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      110171744 (rad23a)
SSDB
Motif
Pfam: UBA ubiquitin XPC-binding Rad60-SLD Rad60-SLD_2 Crinkler UBA_3 Dsc3_N Ubiquitin_2
Other DBs
NCBI-GeneID: 110171744
NCBI-ProteinID: XP_020793177
LinkDB
Position
Unknown
AA seq 361 aa
MQITLKTLQQQTIQIEIDPEQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
EYKIDEKNFVVVMVSKAKPAAAASPPVSEAPKPPSQESTAPAPAPASAPAPTPSAVPTPP
DEPMEEAREEPKEEPSAAAGEPQQPASSSGSSQSMDPSSALVTGAEYENMLTAIMAMGYE
RERVVAALRASFNNPHRAVEYLLTGIPNSPVQESNPPPSGPTEAPSEGENPLAFLRVQPQ
FLNMRRAIQQDRSMLPSLLQQLGRENPQLLQVTTHNXXXXXMLNEPMGGGGDAPELGDIG
AAGEEGAPVSYIPVTAQEKEAIERLKALGFPEPMVIQAYFACEKNENLAANFLLNQELDE
D
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgcagatcacactgaaaacactgcaacagcagacaattcagattgagatagatcccgaa
caaacggtgaaggctttgaaagagaagatcgaagcagaacgaggaaaagacaattttcct
gtgtctggacagaaattaatatatgctggtaaaattcttcaagatgacacgcccattaag
gaatacaaaatagatgagaagaactttgttgttgtgatggtttcaaaggctaagcccgct
gctgctgcctctcctcctgtctcagaagcgcccaaacctccctcacaagagtccactgcc
cctgccccagctcctgcctctgctcctgcccccaccccctcagcagtgcccactcccccc
gatgagcccatggaagaggccagagaggagcccaaagaggagcccagtgctgcagctgga
gaaccgcagcaacctgccagctccagtggcagcagtcagagcatggacccctcgtcagct
cttgtgacgggggcggagtacgagaacatgctgacggcaatcatggcaatggggtatgag
cgggaacgagtggtggctgctcttagggccagcttcaacaacccgcacagagccgtggag
tacttgctcactggcatccccaacagcccggtccaggaaagcaaccctcccccctccgga
cccacagaagccccatcggaaggagaaaacccgctggcgttcctacgggttcagcctcag
ttcctcaacatgagacgggccatccagcaggaccgctccatgctgccctctctgctgcag
cagctgggccgggagaacccccagctcctacaggtaacaacccataatnnnnnnnnnnnn
nnnatgctgaatgagccgatggggggaggcggagacgccccagagctgggagacattgga
gcagctggagaagagggagctcctgtgagctacatcccagtcactgctcaagagaaggag
gccatcgagaggttaaaagcgctgggtttccctgagccgatggtaatccaggcctacttt
gcctgtgagaagaacgagaacctggcggccaacttcctcctgaaccaggagctggatgaa
gactga

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