Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110172137
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Entry
110172137 CDS
T05002
Symbol
shprh
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bpec04121
]
110172137 (shprh)
Enzymes [BR:
bpec01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110172137 (shprh)
Ubiquitin system [BR:
bpec04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110172137 (shprh)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
PHD
zf-C3HC4_2
zf-RING_5
zf-RING_2
TPR_10
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
110172137
NCBI-ProteinID:
XP_020793618
LinkDB
All DBs
Position
Unknown
AA seq
1653 aa
AA seq
DB search
MSSRRKRAPPVRVDEEAKKRLEWNMLEDRKNEVILEEDPDQVPTCSNFIELTPNSEPQNE
TATCSTVKTTEELPSTSTDTPPSPAVSVTVIPLAQLGLFWKALIGEFTVQPKWLPSDFEQ
RTFLLQRKDQQFCLSYRRNNDSEEDSGAQSDLEEDMHKAECSLSRISLGDLDWLLQRRVI
HLCHQGKEDSYKVGIYLLEAGLGKPEFLSEGATRLKKANQILQKMMEYFYDFIVPEVVDN
EEEECDTELERQNIEELYDFVRRVHQREGAELSFEPQHKALVPVLRPYQCQAVNWMLKRE
KAKSSEHKEQGLHHLWHEVVTLCGKKLFYNPYTGCLIREFPLAGVEWPGGILADEMGLGK
TVEVLALILCNPRPNLQQEAYTLPEGQSVNYFVPPPPEKKKAPPRKSEVSQPKTKINFPP
VRSMLLMAMKQMDKGKGVSLSSMSSYMRSCYGYDPVKNRNHIKRTMKKLLDEKKVKQVKG
RGMMGSFKLGFNFTGAQEKLLTPTKMLPKTPESSPRKSFQRRAKDKAEVALQNALTEDDN
DPEALPSSFPMETKKEYEENLSENLDDSNDTFNISTSSQTSQDRSELDLKDKMDDKQEEK
AEIVQNISQEDADLPKRESFFPFNTSDYRFECICGELGIIDYKPRVQCMNCDLWQHADCV
NYKEESLETTPFFCPHCLVAMTPVPTGATLIISPSSICHQWVEEINKHIRSSSLRVLVYQ
GVKRHGFLQPQMLAEQDVVMTTYDVLRSELNYVDLPHSNSEDGRRFRSQKRYMAVPSPLV
AVEWWRICLDEAQMVECVTAKAAEMALRLASVNRWCVSGTPVQRGLEDLYGLVLFLRLDP
FWVKRWWDQLLYRPYRRGNTAPLYSVVSQVLWRSAKKDVIDQIQIPAQTEEVHWLRFSPV
EGHFYHRQHEVCSQDALLRLRKISDWTLKLGALDRRTVHTILGPLLRLRQACCHPQAVRG
EFLPLQKSTMTMEELLKSLQKKCRSECEEAHRQLVCALNGLAGIHIIRGEFAEGAEMYRE
VLRSSEEHKGKLKTDSLQRLHATHNLMELLNAKHPGIPPTLRDDKLSEEAEQLRQHYMTK
YDSEVADAFNALQPVLQNIKELKRKVKLNSPWWLDVVQKAVRSSSEDELVTRVKNELTTN
YKQPINKLSMADKFRDASGLQFILTTKLQELLKSQKTVQEAVKRLEGPASQEVIDEATIC
HLRPNRLPLNNCVFCKADELFNDYESKLFSHTVKGQTAIFEEMIEEEEGLVDDRLPTTSR
GLWAASETERALKAILAFAKSRRLDPELVEEGTTFMELFENWKKEYKVLHEYWGVLRNHV
SAIDELGMATERLRVRLPDEPKPKLLHIIEPHEVEQNRVKLLNDQAMAKSQLQKKLGQQL
YLNNLEKSQDKSTGGLNPEPCPICARPLGQEWAVLTCGHCFCNECIAIMVEQYSVGARNR
AIKCAICRQPTCHSEISYVFTAQDHTHDQEVPVKGSHSTKVEAVIRTLKKIQIRDAGAKC
LVFSTWQSVLDIIAKALFDNNMEFTQINGTHKFQENLSSFKHDSQINILLLPLHTGSNGL
NIIEATHVLLVEPILNPAIELQAIGRVHRIGQTKPTFVHRFLIKSTIEERMQTMMKTAEK
SHSSSTSMKHSEASVLTVADLAELFTDDTGALE
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagaaggaagcgtgctcctccggtgagagtggacgaggaggcaaagaagagg
ctggaatggaacatgctcgaggaccggaagaacgaagttattttggaagaagatcctgac
caggtcccgacctgctccaactttatcgaactgactccaaacagcgaacctcaaaatgaa
actgcaacttgtagcactgttaaaaccactgaggagttaccaagtacatccacagacact
cccccctctcctgctgtatctgtcactgtaatacccctggctcagctcggtctcttttgg
aaagctttaataggggagttcactgttcaaccaaaatggcttccttcagactttgagcag
aggactttcttgcttcaaaggaaagatcagcagttttgtttaagttacagaagaaataat
gattcggaagaggactcaggggctcagagtgatttagaagaggacatgcacaaagcagag
tgcagtctgagcagaatttcactgggagatttggactggcttctgcagaggagagttatc
cacctctgtcaccaaggaaaagaagactcatataaggtgggcatttacctgttggaggct
ggacttgggaagcctgagtttctgagtgaaggagcgactcgtttgaagaaagcaaatcaa
atcctgcagaaaatgatggaatatttctatgattttattgttcctgaagtggttgataat
gaggaggaggaatgtgacacggagttggagagacagaacatagaggaactgtatgatttc
gttcggcgtgttcatcagagagagggggcagagctgagctttgagccccagcacaaagct
ctggtcccggtgctgcggccgtaccagtgtcaggctgtcaactggatgttaaagagagaa
aaggccaagagctccgaacataaagaacaaggtttgcatcacctttggcacgaggtggtg
actttgtgcggaaagaagttgttttataacccttatacaggctgcctgatccgtgagttc
cctctggccggagtggagtggcccggggggatcctggccgatgagatgggactcggaaaa
acagtggaagttttggccctaattctgtgcaaccctcgacccaacctgcagcaggaggcc
tacacgctgccagaggggcagtcagtgaattactttgttcctcctccgccagagaagaag
aaagctcctcctcgcaaatcagaagtctctcagccaaagacaaaaatcaattttccaccg
gtgcgctccatgttgctgatggcgatgaagcagatggacaaaggcaaaggcgtctccctg
tcctccatgtcctcgtacatgcgcagttgctacggttacgaccccgtgaagaaccggaac
cacatcaagagaaccatgaagaaactgctggacgagaagaaggtcaagcaggtcaaaggt
cgcggcatgatgggctccttcaaactcgggttcaacttcacaggagctcaggagaaactc
ctcacgccaactaagatgcttcctaaaactccagagtcctcacctcggaaatcatttcag
agacgagcaaaggacaaagctgaggtggctctccaaaacgctctgactgaagatgacaac
gatcctgaggcgttaccgtcctccttccccatggaaacgaagaaggaatatgaggaaaac
ttatctgaaaacttggacgattcaaatgacacttttaacatctcaacctcctcccaaact
tctcaggacaggagcgagttggatttgaaagacaaaatggatgataaacaagaggaaaaa
gctgaaattgtgcagaatatttcacaggaggacgcagacttgcccaaacgtgaatctttt
tttccgtttaacacctcagactatcgatttgaatgcatctgtggagagttggggattata
gattacaaaccgagggtgcagtgtatgaactgtgacctgtggcagcacgcagactgtgtc
aactacaaagaggagagcctggagaccacgcccttcttctgcccgcactgtttggtcgcc
atgacgcccgtgcccaccggtgccaccctgatcatctcgcccagctccatctgccaccag
tgggtcgaggagatcaacaaacacatccgctcctcctcactcagagtcttggtgtaccag
ggcgtgaagcgtcatggtttccttcagcctcagatgttggcggagcaggacgtcgtcatg
acaacgtacgatgtgctgcgctcagagctgaactatgtggacctgccccatagcaacagt
gaggacgggcgccgcttcaggagccagaagaggtacatggccgtgcccagccccctggtg
gccgtcgagtggtggcgcatctgcctggacgaggctcagatggtggagtgtgtcacagcg
aaggcggctgagatggctctgcgtttggcctcagtgaaccgatggtgcgtcagtgggact
ccagttcagagaggtttagaagacctgtacgggctggtgctgttcctcagactcgacccg
ttctgggtgaagcgttggtgggaccagcttttgtaccgcccctatcgccgtggtaacacg
gctcctctgtacagtgttgtcagtcaggtcctgtggaggtcggccaagaaggacgtcata
gaccagatccagatccccgcgcagacagaggaggtgcactggctccgcttctctccggtg
gagggacacttttaccacagacaacacgaggtctgctcccaggatgcactgctgcgactc
aggaagatctcagactggaccctgaagctcggagctctggatcgccgcaccgttcacacg
attctggggcctctgctcagactgagacaggcctgctgccacccgcaggccgtcaggggg
gagttcttacccctgcagaagagcacgatgacgatggaggagctgcttaagtctctgcag
aagaaatgcagatccgaatgcgaggaggcccacaggcagctggtgtgcgctctcaacggc
ctggctgggatccacattatcagaggtgagtttgcagagggagcagagatgtacagagag
gtgctgcgctcatcagaggagcacaaagggaaactgaaaacagactctctgcagagactt
catgccactcacaatctgatggagctgctgaacgccaaacacccaggaatccccccgact
ctgagagacgacaaactcagtgaagaggctgagcagctccggcagcactacatgaccaag
tacgactcagaagtggcagacgcttttaacgctctgcagcccgttctacaaaacatcaaa
gaactcaaacgcaaagtgaagctaaactctccctggtggttggacgtggtgcagaaagcc
gtccgcagcagctcagaggatgaactcgtaacaagagtcaaaaatgaactaaccacaaac
tacaaacagcccatcaacaagctctccatggccgacaagttccgagatgccagcggtctg
caattcattctcaccactaaacttcaggagttgttgaaatctcagaaaacagtccaggag
gcggtgaagaggctggagggaccggcctctcaggaagtgatcgatgaagctacaatctgc
cacctcagacccaacagactgcccctcaacaattgtgttttttgtaaagccgatgaactt
ttcaatgattatgagtccaagctgttttctcacacggtgaagggtcagacggccatcttt
gaggagatgatcgaggaggaggaggggctggtggatgatcgtctgcccaccacgagcaga
ggtctgtgggcagcgagtgagacggagcgcgccctcaaagccatcctcgccttcgccaag
tccagacgcctggacccagagctggtggaggagggcaccaccttcatggagctgtttgag
aactggaagaaagaatacaaggtgcttcatgagtactggggcgtgctgaggaaccatgtg
tctgccatcgatgagctggggatggccacagagagactacgagtgagactcccagacgag
cccaaacccaaactactgcacatcatagagcctcatgaggtggagcagaacagagtgaag
ctgctgaacgatcaggccatggctaaatctcagctccagaagaaactgggacaacagctg
tacctcaacaaccttgagaagtctcaggacaagtcaacaggaggcctcaacccagagccg
tgccccatctgtgcccgaccactggggcaagaatgggcagttcttacctgtgggcactgc
ttctgtaatgagtgcatcgccatcatggtggagcagtacagcgtcggagcgaggaacagg
gccatcaaatgtgccatctgcagacagcccacctgccactccgagatctcatacgtgttc
accgcccaggaccacacccacgaccaggaggtgcccgtcaaggggagtcactccaccaaa
gtggaggctgtgatccgaaccctgaagaagatccagatcagagacgcaggggccaagtgt
ctcgtcttctccacgtggcagagtgtgttggacatcatcgctaaagccctgttcgataat
aacatggagtttactcagattaatggaactcacaagtttcaggagaatctgagctcgttc
aaacacgactctcagatcaacatcctgctgcttcctctccacacgggctccaacggtctg
aacatcatcgaggccactcacgtgttactggtggaacccatcctcaacccggccatagag
ctgcaggccataggcagagtgcaccgcataggacagaccaagcccacatttgtgcacaga
ttcttgatcaaatccacaatagaagagcggatgcagacgatgatgaagacggctgagaaa
agccacagcagcagcacgtccatgaagcactcagaggcttctgttctgacggtggctgat
ctggccgagctcttcacagacgacactggagctctggagtga
DBGET
integrated database retrieval system
