Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110172690
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Entry
110172690 CDS
T05002
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04137
Mitophagy - animal
bpec04140
Autophagy - animal
bpec04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110172690
04137 Mitophagy - animal
110172690
04148 Efferocytosis
110172690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpec03000
]
110172690
Transcription factors [BR:
bpec03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110172690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
110172690
NCBI-ProteinID:
XP_020794266
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
METPGAPVVAKRSNSEQRKLRSRDAARCRRSQETEVFYELAHVLPLPRRVSTHLDKAAIM
RVTLSYLRLRHLLTTEAENSLEDPMDQFYSQVLGGFIMVLSEEGDIIYLSESVSAHIGIT
QLELLGQNLYEFVHPCDQEELRDMLTTRTGVSRKQAATDRSFFLRVKNTLTNRGRTVNLR
SATWKVLHCIGHMRSQGGNRILSLLCEPLPHPSSVEFPLDSSTLLTRHSMDLHFTHCEGR
VLELLGYEPYQLIGCSAYHFYHALDFDHINSSLQILLSKGQVRTKQYRFLANNGGFVWIE
TQATVLYSRSGQPEAIVCLNFILSAIEQAHVLLSVEQRQCEDLKKEPQSPTPQENAHTNT
ESPAEPCSPGPALCPGNMVPTPQTLCSLWGPFGLQAGSEGCSCFCPTGLTKLSFSSPKPN
SEPTAPQDLCSPALRQLLSPIFNMSPSSPVSSSQAPSPKPEVALSQEQPMDTSGVERFFA
MWPDAQKDQGHTLLQMDDMDLDMLAPYISMDDDFQLCGLSVPEETEAPGPSALGSRSRKR
VFSVDAEECPDKRHKGPLSMEEKQLQSHGLLGCLEENNQSGRGWNQLLTDKDPVLGGVQS
EHTALMAELFLSSPPDLSPPLSPMT
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcccggggcacccgtagtggccaaacggagcaactctgagcagaggaagctg
cgctctcgtgatgcagcacggtgcagacgaagccaggagactgaagtgttctacgagctg
gcccatgtgctgcccctgcctcgtcgtgtttccacacacctagacaaggccgccatcatg
agggtcacactgagctatctgcgactgcgccacctcctgacaactgaggcagagaacagc
ctggaagaccctatggaccagttctactctcaggttctgggaggcttcatcatggtcctg
agtgaggaaggagacatcatctacctgagtgagagtgtgagcgctcacatcgggatcaca
cagctggagcttctgggccagaatctgtatgagtttgtccacccatgtgaccaggaggag
ctgagggacatgctgaccacacgcactggggtgagcaggaaacaggccgccactgacagg
agctttttcctgcgtgtcaagaacacactgaccaacagggggcgcactgttaacctcaga
tcagcgacctggaaggtcctgcactgcatcggacatatgcgctcacaagggggcaataga
attctgagcctcctgtgtgagccccttcctcacccgtccagtgtggagttccccctggac
tcgtccacccttctgaccagacacagcatggacctgcacttcacccactgcgaaggccgg
gtgctggagctgctcgggtatgagccgtaccagctgattggctgctcagcgtaccacttc
taccatgcactggattttgaccacatcaacagcagcctgcaaatattgctgtctaaaggc
caagtcaggaccaagcagtaccgctttttggcaaacaatgggggctttgtttggattgag
acccaggccacagttctgtacagccggagcggtcagccagaagccattgtatgcctcaac
ttcatccttagtgccatcgagcaggcccatgtgctgctctcagtggagcagaggcagtgt
gaagacttgaaaaaagagcctcaatctccaaccccacaggagaatgcacacaccaataca
gagtcaccagcagagccctgcagccctgggcctgctctctgcccaggtaacatggtccca
actccacagaccttatgctccttatgggggccatttggtttacaggcaggctctgaagga
tgttcatgtttttgtcccacaggcctcaccaaactgtcattctccagtccaaaaccaaac
agtgagcccacagctccccaggacctgtgtagccctgcactgaggcagctcctgtctcct
attttcaacatgtcaccctcctcacctgtctcctcctcccaagccccatcccctaaacca
gaagtggctctgagtcaagagcagcccatggacactagcggggtggaacgcttctttgcc
atgtggcctgatgcacagaaggaccaaggccacactctactgcagatggatgatatggac
ttggacatgctggctccatacatctctatggacgatgacttccagctttgcggcctgagt
gtaccagaggagactgaggccccaggcccttcagcactgggctccagaagtaggaaaaga
gtcttcagtgtggatgctgaagagtgccctgacaagaggcacaaggggcccctgtccatg
gaggagaagcagctgcagagccatggtttactgggctgcctggaggagaataaccaatca
gggcgtggttggaaccaattgcttacagacaaagacccagtgctcgggggagtccagagc
gagcacacagcgctgatggcagagctcttcctcagtagccctcctgacctgtccccaccc
ctgtcgcccatgacatga
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