Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110172691
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Entry
110172691 CDS
T05002
Symbol
ercc2
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPD subunit
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03022
Basal transcription factors
bpec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110172691 (ercc2)
09124 Replication and repair
03420 Nucleotide excision repair
110172691 (ercc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpec03021
]
110172691 (ercc2)
03036 Chromosome and associated proteins [BR:
bpec03036
]
110172691 (ercc2)
03400 DNA repair and recombination proteins [BR:
bpec03400
]
110172691 (ercc2)
Enzymes [BR:
bpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110172691 (ercc2)
Transcription machinery [BR:
bpec03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110172691 (ercc2)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110172691 (ercc2)
DNA repair and recombination proteins [BR:
bpec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110172691 (ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
SesA
DUF6939
Histone_HNS
Motif
Other DBs
NCBI-GeneID:
110172691
NCBI-ProteinID:
XP_020794268
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MKLNIDGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ
RAFPLNVTKLIYCSRTVPEIEKVVEELRKLMEFYTKQIGESNNFLALALSSRKNLCIHPE
VSSLRFGKEVDGKCHSMTASYIRAQRHSNPNLPVCRFYEEFDAVGRQVPLPTGVYNLDDL
KDYGHRKGFCPYYLARYAILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID
NVCIDSMSVNITRRTLDRCQNNVDTLHNTIQNIKETDAARLREEYRRLVEGLKEAHVARE
TDVYLANPVLPDQILQEAVPGTIRTAEHFVGFLRRFMEYLKSRLRVQHVVQESAPQFLKD
IFEKVCIDRKPLRFCAERLQSLLRTLEIADIADFSAVTLISNFATLVSTYSQGFTIIIEP
FEDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVIITSGTLSPLDIYPRMLDFRPVTMAS
FTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFT
SYVYMENIVASWYEQRILENIQRNKLIFIETQDAAETSMALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDHFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHISEGSLNLTVDESVQLAKHF
LRQMAQPFRQEDQLGLSLLTLEQLQSEEMLQKITQMAHQN
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaatatcgatggcctgttggtctacttcccgtatgactacatctacccagag
cagtactcttacatgctggagctcaagaggaccctggatgcaaagggtcatggagttttg
gaaatgccgtcaggaactgggaagactatctctctcctctctttgattgtggcctaccaa
agggctttccctctgaacgtgaccaagctcatctactgttccagaactgttccagagatt
gagaaggtcgtggaggaactgagaaagctgatggagttttataccaaacaaataggagag
agcaataacttcttagctctggctctgtcctccaggaagaacttatgcatccacccagag
gtgagctcgctgcgctttggcaaagaggtggatgggaagtgtcacagtatgactgcctca
tacatccgagcccagcgccatagcaacccaaacctgcctgtgtgccgcttctacgaggag
ttcgatgctgtgggccgccaggtgcctttgcctacgggtgtctacaatcttgatgacctg
aaggactatggacacaggaaaggcttctgcccgtactacctggcacgctatgcaatcctc
catgccaacattgtggtgtacagctaccactacctactggaccccaagatcgcagacctg
gtgtccaaagagctggccaagaaatcagtggtggtgtttgatgaggctcataatatagac
aacgtgtgcattgactccatgagtgtgaacatcaccaggaggactctggaccgctgccag
aacaatgtggacacactgcacaacaccatccagaatataaaggagactgacgctgcacgt
ctgagagaggagtaccggcgtttggtggaggggctgaaggaggctcatgtggcccgagag
actgacgtgtacctggccaatcctgtgttaccagaccagatcctccaagaggctgtccct
ggcaccatccgcacagctgagcactttgtgggcttcctgcgccgctttatggagtacctc
aagtcccggctccgggtgcagcatgtggtgcaggagagtgccccccagttcctcaaggac
atctttgagaaggtgtgcatcgaccggaagccgctcaggttttgtgcagagcgtctgcaa
tctctgcttcgcacgctggagatcgcagacattgcagacttctctgctgtcactctcatc
tccaactttgccacactggtcagcacatacagccaaggattcaccatcatcattgagccg
tttgaagacaggacgccgaccatcgccaacccagtgctgcacttcagctgcatggaccca
tcaatcgccatcaaaccagtgttccagaggttccagtcagttatcatcacctcagggacg
ctgtctcctctggacatctatccccgtatgttggacttccggcctgttaccatggcttcc
ttcaccatgacactggcacggacatgcctctgtcccctgatcgtgggccggggaaatgac
caggtggctctgagctccaagtttgagacacgagaagactttgcggtcattcgtaactat
ggcaacctgctactggagatgtcagccatagttcctgatggcatcgtggccttcttcacc
agctatgtgtacatggagaacatcgtggcctcctggtatgagcagcgcatccttgagaac
atccagaggaacaagctgatcttcattgagacacaggatgcagcagagaccagcatggcc
ctggaaaagtaccaggaggcatgtgagaacggcagaggggccatccttttgtctgtggcc
cggggaaaggtgtctgagggcattgactttgttcaccactttggccgggcagttatcatg
tttggtgtgccatatgtctacactcagagccgcatcctgaaggctcgcctggagtaccta
agggaccactttcagatcagagaaaatgactttctgacgtttgacgccatgaggcacgcg
gcacagtgcgtggggcgcgccatccgaggcaagaccgattatggactcatgatctttgca
gacaagcggtacgcccgggctgacaagaggggcaagctcccacgctggatccaggagcac
atcagtgaaggcagcctcaacctgactgtggacgagagcgtgcagctcgccaaacacttc
ctccgacagatggcacagcccttcagacaggaggaccagctgggcctgtctctgctcact
ctggagcagctgcagtcggaggaaatgttacagaagatcactcagatggcccaccagaac
taa
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integrated database retrieval system
