Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110172742
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Entry
110172742 CDS
T05002
Symbol
wdr33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110172742 (wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110172742 (wdr33)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110172742 (wdr33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
DSE1_N
WD40_Gbeta
EIF3I
Beta-prop_WDR19_1st
ASA1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
eIF2A
CFAP251_N
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
110172742
NCBI-ProteinID:
XP_020794335
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MASELGSPQRFFHMPRFQHQAPRQVFYKRPDLAQQHAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRHLENRLWQRDHRDQRAIQPDAACYNDVVPVCPCLPLSAPVCPCLQWTPEGRRLVT
GASSGEFTLWNGLTFNFETILQAHHSSVRAMTWSHNDMWMLTADNNGYVRYWQSNMNNVK
MFQAHKEAIREASSVQNSERGKKFGNAMMTTSRSMVQTGKAVAVAWHPVHEGLFASGGSD
GSLLFWHTGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRD
RYNLNLLPGMSEDGLEYDDLEPNSVASIPGMGLPDQLKAALEQEHNKEASPDLEMWIPGL
DWGVDEVMGKDAKKVPQKKVPYAKPILAQFQQAWAENKVPLAPPSDLGPDRKLDPTQNQK
RNQAEIEQDLASLQYTHPQILQQMKMNSDMGPPPGPGGPGGPGGPMGQFPGGPGPGGPPP
QGFNPNMGPGGPPFMGPGQMGPPDMQRHPGPPRNMGPQGPHMGPPRVMMGPPPRGMGPHD
PQMGPNMMGPPRNHGPNNFMQGPPGNMGPQGPFMHQGQNSGPMMHGMGPQGPQGPQGPQG
PPGPNKDPRGPGLHMGPQDQFWEQDFDPGQDWRPQGFGGRGHRGNGGNWGPDNYGEFRGR
GSAFSTSDADALDMRLKCQRQTLKTHCVDARFTPR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagagctgggctcgccgcagcggttcttccacatgccgcggttccagcaccag
gcgccgcggcaggtgttctacaagcggccggacctggcgcagcagcacgccatgcagcag
ctcaccttcgacggcaaacgcatgaggaaggccgtcaaccgcaagaccatcgactacaac
ccgtccgtcatccgccacctggagaatcgactttggcagcgagatcacagagaccagaga
gccatccaaccagacgcagcctgttacaacgacgttgtccctgtctgtccctgtctgccc
ctgtctgcccctgtctgcccctgtctgcagtggactcctgagggcaggcgtctggtgaca
ggagcgtcaagtggggagttcactctgtggaacggactcaccttcaacttcgagaccatc
ctccaggctcaccacagctcggtgcgggcgatgacctggtctcataacgacatgtggatg
ctgacggccgacaacaacggctacgtcagatactggcagagcaacatgaacaacgtcaag
atgttccaggctcacaaggaggccatccgggaagcaagttcggtgcagaacagtgaaaga
ggaaagaagttcggaaacgccatgatgacgacgagccgcagcatggtgcagacggggaag
gccgtcgctgtggcgtggcatccggtgcatgagggtctgttcgccagcggaggttcagac
ggttccctgctgttctggcacacgggcgtggagaaggaggtgggggggatggagatggct
catgaggggatgatctggagtttggcctggcacccactgggacacatcctctgctccggg
tccaacgaccacaccagtaagttctggaccaggaatcgtcccggggataagatgagggat
cgatacaacctgaacctgctgccggggatgtccgaggacggactcgagtacgacgacctg
gagcccaacagcgtggcctcgatccctgggatgggtctccccgaccaactgaaggcagca
ctggaacaagaacacaataaggaggcgtctccggacttggagatgtggatcccggggttg
gactggggcgtggacgaggtgatgggcaaagacgccaagaaggtcccacagaagaaagtc
ccgtacgccaaacccatcctcgcccagttccaacaggcgtgggcggagaacaaagtccct
ctggctccaccctcggacctgggacccgaccgaaaactggacccgacccagaaccagaag
agaaaccaggccgagatcgaacaggacctggccagtctgcagtacacacaccctcagata
ctacagcagatgaagatgaactcggacatgggcccccctccgggcccagggggacctgga
ggacccgggggccctatggggcagttccctgggggccccgggcccggggggcctcctcct
cagggcttcaaccccaacatgggccccggggggcctcccttcatgggccccggacagatg
gggcccccggacatgcagcgccaccccgggcctcccaggaacatgggccctcaggggcct
cacatgggccccccaagggtcatgatgggccctcccccccgaggcatggggccccacgac
ccccagatgggcccgaacatgatgggcccccccaggaaccacggccccaacaacttcatg
cagggaccccccggaaacatgggccctcaggggcccttcatgcaccagggccagaactcg
gggcccatgatgcacggcatgggccctcaggggcctcagggaccacagggacctcaggga
cccccggggcctaacaaagacccccgggggcccgggctgcacatgggccctcaggatcag
ttctgggagcaggactttgacccggggcaggactggaggccccagggcttcgggggccga
ggacacagaggcaacggaggaaactggggccccgacaactacggagaattcaggggccga
ggttcagcattttcaacttctgacgccgacgccctggacatgcgtctaaagtgtcaacgc
cagacgctcaagacgcactgcgttgacgccagattcacgccacgctga
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integrated database retrieval system
