Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110172875
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Entry
110172875 CDS
T05002
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpec04131
]
110172875 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpec04147
]
110172875 (copb1)
Membrane trafficking [BR:
bpec04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
110172875 (copb1)
Exosome [BR:
bpec04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
110172875 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
Cnd1
HEAT_2
HEAT
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
110172875
NCBI-ProteinID:
XP_020794487
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVTSDSEPPSEVSLKTDLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLTTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDNLRPLIIEKMLEVFHAIKTVKIYRGALWILGEYCSTKDDIQSVMTEVR
RSLGEIPIVENEIKKETGEVKPEDEVSAAPAQKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKLALRYVDIVQDKKKQNSFVAESMLIMVTVLHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRKSLSHMLTVRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNEMTSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNITDLNEYLQHILKSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKTNV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgcagaaaacgtttgctacaccctgatcaatgtcacttctgattcagagcct
ccctctgaagtcagcctcaaaactgacttggaaaaaggggagatcaaggcaaaaactgaa
gcactaaagaaagtcatcattatgatactgaatggcgagaaactacctggacttctcatg
acgatcatccgttttgtcttgccacttcaagaccacacaatcaaaaagttgcttcttgtc
ttctgggaaatcgttcctaaaacgactcctgatggcaagttgcttcaggagatgatttta
gtctgtgatgcctacagaaaggacctgcagcatcccaatgagttcatccgtgggtctacg
ctgcgcttcctgtgcaaactgaaggagtctgagctgcttgagcctctaatgccagccatt
cgtgcctgccttgaacatcgtcacagctatgtccgccgcaatgcagtcctggctatttac
actatctacaggaactttgaacacctcatcccagatgccccagaactcattcacgatttt
cttgtgaatgaaaaagacgcaagctgtaaaagaaatgcttttatgatgttgattcatgct
gaccaggacagggccttggattacctcagcacttgtattgatcaagtccatacctttggt
gacattcttcagcttgttattgtggaactgatttacaaagtctgtcatgcaaacccctct
gagcgggccagatttatccgatgtatctacaatttgcttcagtcctcaagtccagctgtt
aaatatgaggcagctggtactcttgtaaccctttcaagcgccccgacagctattaaagct
gctgcccagtgctacattgatttgatcataaaagaaagtgacaacaatgtgaaactgatt
gtccttgatcgtctgattgaacttaaagagcatcccactcatgaacgtgtacttcaggac
cttgtgatggatatattgcgtgttctcaccacccctgacctggaagtgaggaagaagacc
ttgcagctggcactggaccttgtctcatcacgcaatgttgaagagctggtgatagttttg
aagaaagaggtgatcaaaacaaataatgtaactgaacacgaagatacagataagtacagg
cagctgttggtgcgcactcttcactcatgcagtgtacgcttcccagacatggcggccaac
gttataccagtgctgatggaattcctaagtgacactaatgaggcggctgctgctgatgta
ctggagtttgtgcgagaagctattcagagatttgacaacctgaggcccctcatcattgag
aagatgttggaggttttccatgccatcaaaactgtaaaaatttacagaggggccctatgg
atactgggagagtactgcagcacaaaggacgatattcagagtgtgatgacagaggtccgc
aggtctttgggagagatccccatagtagagaatgaaattaagaaagaaacaggagaggtt
aaacctgaagatgaagtgagtgcagcaccagctcagaaacttgtaacagaaatgggaaca
tacgtgacccaaagtgccctcagctcctccaggccatccaagaaagaggaagacaggcct
ccacttcgtggtttcttgatggatggagacttctacgtggctgcttctttggccaccacg
ctaacaaaactagctttacgttacgttgacattgttcaagacaaaaagaaacagaattct
tttgttgcagaatccatgctgatcatggtcactgtgctgcacctgggcaagtcgtctctg
cctaaaaagccaattacagatgatgatgtggaccgcatctcactgtgcctgaaggtgctg
tcagagtgctcgccgctcatgaacgacattttcaataaggagtgccgcaaatccctgtcc
cacatgctgactgtcagactggaggaggagaagctgtcacaaaagaaagaatctgagaaa
cgtaatgtgacagtacaagcagacgacccgatctcatttatgcagctcacagccaaaaat
gagatgacttctaaagaggaccagttccagctcagtcttttggccgctatggggaacact
cagaggaaggaagcagcagatccacttgcttcaaaactcaacaaggtcactcagctaaca
ggcttttcagacccagtatatgctgaagcctatgttcatgttaatcagtatgacattgtc
cttgatgtgctcgtcgttaaccaaaccagtgacactcttcaaaactgtactctggagctt
gcaacattaggtgatctcaaattagttgaaaaaccatctccactaactctggctccacac
gattttgccaacattaaggctaatgttaaggtggcctcaacagagaatggcatcatattt
ggaaatatcgtgtatgatgtgtcgggtgctgccagtgacagaaactgcgttgtcctcagt
gatattcacattgatatcatggattacatccaaccggcctcatgtactgatgcagagttc
aggcaaatgtgggcagagtttgaatgggaaaacaaggtgacagtgaataccaacattact
gatctcaatgagtaccttcaacatatcctcaagtccactaacatgaaatgcttgactcct
gaaaaggccctctctggtttctgtggctttatggcagcaaatctttatgctcgctccatc
ttcggtgaagatgccctggctaatgtgagcattgagaagcccattcacctagggccagat
gcacctgtcaatggtcacatccgcatcagagccaaaagccagggtatggccttgagtctt
ggtgataaaattaatctctcccagaagaagacaaatgtctga
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