Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110172888
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Entry
110172888 CDS
T05002
Name
(RefSeq) LOW QUALITY PROTEIN: transforming growth factor-beta receptor-associated protein 1 homolog
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110172888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpec04131
]
110172888
Membrane trafficking [BR:
bpec04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110172888
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_2
Vps39_1
CNH
Clathrin
Motif
Other DBs
NCBI-GeneID:
110172888
NCBI-ProteinID:
XP_020794504
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MSVKAFELVPAVERELLMGDKARINIECIECCGKHLYIGTNDCFIHHFLLEEVASSKGKL
SFLAQKLLHKYLGLKKPVTELRAASALERLIVLCDGVLFLVDMLTLETPPGAGGAKIRGV
TTFCINENPVTGDPFCVEMGILSSKRRTVQIFMVYEDRVQLVKEVNTPEQPCAVSLDGYF
LCLALTTQYMILNYNSGANQDLXXXXXXXXXXXXXEERKPIVKRIGREEFLLAAPGGLGM
FANAEGVSQRAPVNWSESVMGAAVCFPYVVALDESFITVHSMLDQQLKQTLPFRDGHILQ
DFEGKVILASTKAVYILVPLPLERQIQDLLASHRVEEALILTEGAQRNIPKEKFQILHKR
ILQQAGFIQFGQLQFLEAKEHFRKGQLDVRELISLYPLLLPSSSSFTRCHPPLHEFADLN
HLAQGDQEKVQRCKKFLISYLKEVRSTEVANGCREDVDTALLKLYAEQDHDSLLDLLASE
NFCVLADCVPWLEKYHKYFALGLLYQYHGQDSAALQLWIRVADGDLEDATRSDLFEYIVD
FLCSCSNLDLVWKYADWALRKNPTIGVQVFTKRIVRKNQPELCPDDAVTYLTKHREALLL
YLEHLVLERQIQKETFHTHLAVLYLERVLALISETPLDEVQLLKARDRLQAMLRESNLYR
VQYLLGKINNCESLLLERATLHGKLEEHDKALHILVYELKDFPSAEAYCIWASESRDSAY
RQKLFHRLLGVYLDTQSQGASAGGGGELEMAAVDLLNRHGEVFDAVQVLNLLPEGWSLQL
LRPFLGRAIRASMHACRTSQIALGLARSENVQLLNDRLKERKKPILVSDKKGCFMCHNTF
SEPEVVCLPGGVPVHTHCVADRIQNSPSKKHLTNSSNHT
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaaggcctttgagctggtccccgctgtggagcgagagctcctcatgggagac
aaggctcgaatcaacattgaatgcattgagtgctgtggaaagcacctgtacatcggcacc
aatgactgcttcatccaccatttccttctggaagaggtcgcttcttcaaagggaaaactg
agttttttggctcaaaagctgcttcacaaatatctgggactcaagaagccagttactgag
ctgcgggctgcatcggctttagagcgactgatcgtgctctgtgatggagtgctctttctt
gttgacatgttgacactagaaactccccctggagctggaggagccaaaatcagaggcgtc
actacattctgcattaatgagaacccagtcactggagatcccttctgtgtagagatgggg
atactttcctcaaaacggcggacagtgcaaatttttatggtttatgaggaccgagtgcaa
ctggtgaaggaggtgaacacaccggagcagccttgtgctgtctctctcgatggatacttt
ttgtgtttagctctgaccacacaatacatgatcttgaactacaactctggagccaaccag
gacctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngaggagaggaagcct
atagtgaagagaattggcagagaagagttcctgttggcagcacccggtggtcttggtatg
tttgctaatgcggagggggtttcccagcgtgctccagtgaactggtctgagagcgtgatg
ggtgctgcggtttgctttccttatgtcgtggccttagacgagagcttcatcactgtccac
agtatgctcgaccaacagctcaaacaaactctgcctttcagggatggacacattctacaa
gactttgaaggaaaagtcattctagcttccactaaagcagtgtacatattagtgccattg
ccccttgagagacaaatccaggatttattggccagtcacagagtagaggaagcccttatt
ctcacagaaggagcacagaggaatattcccaaagaaaagtttcagattttgcacaaaagg
atccttcagcaggctggtttcatacagtttggccagcttcaatttttggaagcaaaagaa
cattttagaaaagggcagttggacgtccgggagctcatctctctttacccactactgctg
ccttcctcttcctccttcactcgctgccatcctcctcttcacgagttcgctgatctaaat
cacttggctcagggtgaccaggaaaaggtccagaggtgcaaaaagttcctcatcagttac
ttaaaagaggtgcgaagtacagaggtggccaatggctgcagagaggatgtggacactgca
ctgttgaagctttacgctgaacaggatcatgacagccttttagatctgctcgcctctgaa
aacttctgcgtgttagcagactgtgttccatggctagagaagtatcacaaatattttgca
ctagggcttctttaccagtaccatggtcaggattcagcggctcttcagctgtggatccgt
gtggcagatggagatttggaagatgctacgaggtctgatctgttcgagtatattgtagac
tttctctgctcctgctccaatctggatctggtgtggaagtatgcagactgggccttacgc
aagaatcccactataggagttcaagtttttacaaaaagaattgtccgtaaaaatcagccg
gaactgtgccccgatgatgctgtgacgtatttgacgaagcatcgtgaggctctgttgctt
tacctggagcacctggtcctcgagaggcagattcagaaggagacgttccacacccacctg
gctgtgttgtacctggagagggttctggcgttgatatcggaaacacctttggacgaagtg
cagctgttgaaggcacgagacagactgcaggctatgctgcgcgagtccaacctttatcgt
gttcagtatcttttaggtaaaataaacaactgtgaaagtctgttgttggagcgggccaca
ctacatggcaaactggaggagcacgacaaggcgttgcacattttggtttatgaactcaag
gatttcccatctgcagaggcctactgtatatgggcctctgaatccagggactccgcatat
agacagaaactcttccaccgtttattgggagtgtatttagacacgcaatcccagggtgca
tcagcagggggcggtggcgagctggagatggcggctgtggaccttttgaaccgtcatggg
gaggtgtttgatgcagttcaagtcctgaatctgctccctgaaggatggtccctgcagctg
ctgaggcctttcctgggtagagcgatccgggccagtatgcacgcctgccgtacatcccag
atcgctctggggctcgcacgctcagagaatgtacagctgttgaatgacaggttaaaggag
aggaagaaacccatcctggtgtcagacaagaagggctgtttcatgtgccacaatacgttc
agtgaaccggaggtggtgtgcttgcccgggggagtcccagtccatacgcattgtgtcgcc
gaccgaatccaaaactcaccctccaaaaaacatttaactaatagcagtaaccacacgtga
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