Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110172936
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Entry
110172936 CDS
T05002
Symbol
pcdh17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bpec04515
]
110172936 (pcdh17)
Cell adhesion molecules [BR:
bpec04515
]
Cadherins
Protocadherins
110172936 (pcdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
Sde0182_C
Motif
Other DBs
NCBI-GeneID:
110172936
NCBI-ProteinID:
XP_020794556
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MYLSIFFFLLLWAQALTLKNLNYSVPEEQGPGTVIGNIAKDARLGLEQTGQGGQGKKANF
RVLENSAPHLIDVDPQSGLLYTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDIQD
INDNSPTFPSDQIDIDISENAVPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLEVK
SRGDGTKFPELVIQRPLDREERSHHTLILSATDGGEYPRSGTMQINVKVIDSNDNSPVFD
QPSYVVEIPENSPPGKVLIDLNATDPDEGNNGQVVYSFSGYAPERIRELFSIDSRTGVIK
IQGEIDYEESPVIEIDVQAKDLGPNPIPGHCKVTVKVLDRNDNWPSIGFVSVRQGAISEA
APPGTVIALVRVTDKDSGRNGQLQCRVLGNVPFKLEENYDNFYTVVTDRPLDREMQDEYN
VTIVAKDNGLPPLNSTKSFTVKILDENDNVPRFTKSVYLLQIPENNIPGEFLGSVLAHDP
DLGQNGTVYYSIINSNVSGGDVNTYVNVNAANGAIYAVRSFNYEQIKYFDFKVLAKDAGS
PHLESNATVRISVLDVNDNIPVIVLPLLLNDTAEIHVPRNVGVGYIVTTVRAVDNDYGES
GRLTYEISDGNEENLFEIDPVTGEVRTAHQFWEDVSPNVELIIRVSDHGRPTLTAAARLI
IKASNGPLSGGAPHVTDRQNWDMSLPLIVTLSIISIMLLAAMVTIAIKCKRENKEIRTYN
CRIAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTR
LPLSSPRSDVMYLKPTANSLSVPQGHVGCHTSFTSPVTSTTDTPTNRMSIIQTDNFPSEP
NYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKLKST
GVKPPPQEQDEDCVNCTDECRVLGHSDRCWMPKFPGGGNQAEGVDYRNNMFVPAGMETVP
EAENYESVNPNGKKTFCTFGKERRDHTILVANVKPYLKAKRALSPLLQEVPSASSSPTKG
CSTLASCATVKSPADGAEGKPPPVTCSGHYGPPDGQFLSPTKQREGVYPPLPADPVAKVL
AEARSRISQEASGEMETVLEQGEPDGREGMDADQVVRDIDKLLQDCRGSESTGTLRK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttctattttctttttccttctcctgtgggctcaagccctgacattaaaaaac
ttgaattactcggtcccagaagagcagggacctggaacagtgattgggaacatagccaaa
gatgccaggctgggactggagcagacagggcagggaggtcaggggaagaaagccaacttt
agggtgctggagaactctgcacctcatctcatcgacgtggaccctcagagtggactgctc
tacacaaagcaacgcattgatcgggagacattgtgcaagaggaatcctaagtgccagctg
tccatggaggtgtttgcaaatgacaaagagatatgcatgatcaaaatagacattcaggac
atcaacgacaactccccaactttcccctcggatcagattgatattgatatttctgaaaac
gctgtgccggggacacgttttccactcacaagcgcgcacgacccagatgcaggggagaac
ggactgaaaacctatcaaataacacgtgatgactacaatctcttctccttggaggtaaaa
tcccgcggggacggcaccaaatttcctgaattagtgattcaaaggccactagaccgagag
gagcgaagccaccatacccttattctgtctgctaccgatggtggggagtatcccagatca
ggcaccatgcaaataaatgtaaaagttatcgactccaatgacaacagccccgtgtttgac
cagccctcctatgtggtcgaaatccctgaaaattcacccccaggcaaagtgttgattgat
ttaaacgctactgaccctgacgagggcaacaatggacaagtggtgtattcttttagtggc
tatgccccagagaggatccgggagctgttctccatagactccaggacaggagtcataaag
atacagggtgaaattgactatgaagagagtccagtgattgagattgacgtacaggcgaaa
gacctaggtcccaatccaatcccaggtcattgtaaagtcactgtaaaagtgcttgacagg
aatgataactggccatctataggctttgtgtctgtgcggcaaggggccatcagtgaagca
gctcctccaggcaccgtcattgcactggttagagttactgacaaagactcgggcaggaat
ggccaactccagtgcagagtgcttggcaacgtcccctttaaactcgaagaaaactatgat
aacttctacacagtggtgacagacagacctctggatagagagatgcaggatgagtataat
gtcacaatagttgctaaggacaacgggctccctcctttgaattcaaccaagtcttttaca
gtgaagatcttagatgaaaatgacaatgttcctcgcttcaccaagtctgtttacctgctg
caaatacctgaaaacaacatacctggggagttcctcggttcagttctcgcccatgacccg
gatttagggcaaaatgggactgtttactacagcataataaactctaatgtgagcggtgga
gatgttaacacgtatgtcaatgtgaatgcagccaatggagctatatatgcagtgagatcc
ttcaattatgagcaaattaagtattttgatttcaaggttctggctaaagatgcaggctct
ccgcatctcgagagcaacgcaacagtgcgcatcagtgttttggatgtgaatgacaacata
ccagttatagttcttcctctccttttgaatgacacagccgagatccacgtccctcgtaac
gttggcgtcggctacattgtcactacggtcagagcggtggataatgattatggggagagc
ggaagactcacatatgagatttcggatggtaatgaggaaaatctttttgagatcgaccca
gtgacgggggaggtgcggacagcccaccaattctgggaggacgtgagccccaatgtggag
cttatcatccgtgtgtcggaccacggcaggcccacgctcacagccgcggcgaggctaata
atcaaagcttccaatggacccctctctggcggggcccctcacgttacggacagacagaac
tgggacatgtctttgcctctaattgtgactctaagcatcatatctataatgcttttagcc
gctatggtgactatagcgatcaaatgtaagcgggaaaacaaggaaatacgaacttataac
tgtcgaatagcagagtactcacaccctcagctggggaagggcaagaagaagaagataaac
aagaacgacatcatgctggtgcagagcgaggtggaggagcgcgatgccatgaatgtgatg
aatgtggtaagcagtccttccttggccacctctcccatgtactttgactaccagacacgc
ctgccactcagctcaccaaggtcagacgtcatgtacctcaaacccactgccaatagcctc
agcgtgccccaaggccacgtgggatgccacaccagcttcacaagcccagtcaccagcact
acagacacacctactaaccgcatgtctatcattcagaccgacaatttcccctctgagcct
aattatatgggcagcagacaacagtttgtacaaagtagttcgacatttaaagacccagag
cgcgccagcctcagagacagtggccatggcgacagtgaccaggcggacagcgaccaggac
accaacaaagggtcctgctgcgatatgtcagccaaagaggcgctcaaactcaagtccacg
ggagtcaaacccccaccccaagagcaagatgaagactgtgtgaactgcacagatgagtgt
cgtgtcctgggacattcagaccgctgctggatgcccaagttccctggaggaggaaaccag
gcggagggcgtggactacaggaacaacatgtttgtgcccgcagggatggagactgtgccc
gaagcagagaactacgagtctgtcaaccccaacggcaaaaagactttctgcacttttggt
aaagaaaggagggaccacaccatccttgtggccaatgtaaagccgtatttgaaggccaaa
cgcgctctgagccccctgctccaggaggtgccctctgcctccagtagtcctaccaaaggc
tgctccaccctggcctcctgcgctactgtgaagagtcctgcagatggcgctgagggcaag
cctccgcccgtcacctgctcaggccactacggacctccagacggacagttcttatcgccc
accaaacagagagagggggtgtacccgcccctgcccgctgaccccgtggccaaggtgctg
gcagaggcacgctccaggatcagtcaggaagcatctggggagatggagacagtgctggaa
cagggcgagcccgatggtcgtgaggggatggacgctgatcaggtggtccgggacatcgac
aaactcttacaggactgcagagggagtgaatccacaggcacgctcaggaagtga
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