Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110173094
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Entry
110173094 CDS
T05002
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bpec01009
]
110173094 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bpec04515
]
110173094 (pcdh20)
Protein phosphatases and associated proteins [BR:
bpec01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110173094 (pcdh20)
Cell adhesion molecules [BR:
bpec04515
]
Cadherins
Protocadherins
110173094 (pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
110173094
NCBI-ProteinID:
XP_020794725
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MIHRKHPCLSKRGGIWGLCILLLYTSPLSCLGNFSKAKELVYKIKEGLPRGTFIGAIGVD
LNLDFNAEPPFLFNLAQKKVNEQYVTLNNTTGELYTSATEIDRESLCPDNSEVKACILSL
DVLVLPQQYFQLIKVKIVIEDVNDNRPKFPVDEIILTVPENSPINARYAVEQSAVDPDLG
LHGVQTYWLVNDFGVFTLDVEENDGGELTPFLIVTETLDRETQAEYVTDIIAEDGGAPPL
LGAATLKIQISDVNDNCPKFTESHLNVTVHGNTSKGAPLARLHAYDPDLGANAQISYAYS
ERVPRETRSLFHLDRNTGVIKLAGKIESGTAPHYKLTVLANGPGCIPAVATVTLNIIKML
SGPPVVTPRYIALEKDGVVYLKESEPPFSPIAFYTVKNVGSNQKVDCHLEGSGPFRLSPY
QLIKNEYLLETTEALDYETTQEFDLIIVANNSQGLVIKAFLKIQVLDENDNAPVFQQSIV
ELTIDENNPPNTFLTQFQATDQDSDSSGEVIYLLGGDAPGIFELDRVTGVLIVTTSLDRE
EKETYRFIVRALDQGTPRRESIATVVLTVQDRNDNSPRFINKDFTFFVPENFPGYGEIGV
LSVRDADAGENGWVALSILNGTDIFMIDTGRGILRAKTSLDREQQGTYQLWVEAVDGGEP
ALSSVTMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPSTLPGTSITEVYAVDKDTGMNAVI
AYSIIKRKGGEPGSFAIDPQTGNITLKRELSNRGLCSLLVKVSDHGQPEPLYSTVMVNFF
VNETVSNESYIQSLLTREADIEVEEKPWFIGQMKDGPERYELFPCQPVLIALSATCLGLF
LLVVMLTSYICCKRFKRHRKKKKSETEIPLKMTHGSVHVVNRKIRQISNL
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgatccacagaaaacacccctgccttagcaagagaggaggcatatggggcctctgcatc
ctcctgctctacaccagccctctgtcctgtttgggaaatttcagcaaagcaaaagagctt
gtctataagataaaggagggattaccacgtgggacatttataggggccattggagtcgac
ttaaacttggattttaacgcagagcccccctttttattcaatctggctcaaaagaaggtc
aacgagcagtatgtgacccttaataataccactggggagctttacacatctgccacggag
atagacagggagagcctctgtccagacaactcagaggttaaggcctgcatcttgtctctg
gatgttttggtgttaccgcaacagtattttcagctcatcaaagtcaagattgttattgag
gatgtgaacgacaacaggccaaagttccctgtggatgaaattattttaactgtcccggaa
aactcacccatcaatgctcgttacgcggtcgagcagtcggcggttgacccagacttgggg
ctccacggggtccagacgtattggctagttaatgacttcggggtcttcactctggatgtt
gaagaaaatgatgggggagagttgacgccattcctcattgttaccgaaactttggataga
gaaacccaagcagagtatgtaacagatattatagcggaggatggcggggcacctccactt
cttggggctgctacgttaaaaatacagatttcagacgtgaatgacaactgcccaaaattc
acagagtctcacttgaatgttactgtccatggaaatacaagtaaaggagctccactagcg
cgactccacgcttatgaccctgacctgggcgctaatgctcagatcagctacgcctacagt
gagagagtgccaagggagactagaagcttgtttcatttggatagaaacactggtgtcatt
aagctagcaggcaaaatagagtctggcactgccccacactacaaactgactgtattagcc
aatgggcctggttgcatcccagctgttgcaactgttactctcaacataatcaaaatgctc
agcggaccacccgtcgtcacaccaagatacatcgcgctcgagaaagacggagttgtttat
ttgaaggaatcagaacccccgttttctcctatcgctttttatacggtgaaaaatgtaggc
tcgaatcaaaaagtggactgccatctggaggggagtggcccatttaggctaagcccctac
cagctgattaaaaatgaatacttactggaaaccacagaagcactggactatgaaacaaca
caagagtttgacctaatcattgtcgctaataattcacaagggttggtcattaaggccttt
ttaaaaattcaagtgctggatgagaatgacaacgccccggtatttcaacagtctatagtc
gagctaaccattgatgaaaacaaccctcccaatacgttcttaacgcaattccaggctaca
gatcaggatagcgatagcagtggagaagttatctatctcttgggaggggatgcaccaggg
atattcgaactagatcgggttactggcgtccttatagtcaccacatcactggaccgcgaa
gagaaggagacgtatcgtttcatcgtgagggcactggaccaggggacgcccaggagggag
tccattgcgaccgttgtcctgaccgtgcaagatcgcaacgacaacagcccgcgcttcatc
aacaaagacttcacattcttcgtgccggagaatttccctggatacggcgagattggagta
ctttcggttagagatgcagacgcgggggagaacggctgggttgcgttgtcgattttaaac
ggtacagatatttttatgattgacacgggacgcggtatactcagagccaaaacctcgctt
gacagagagcagcaagggacctatcagttgtgggtcgaagctgtggacgggggcgagcct
gctctgtcttcggttacaatggtgacggttttattattggatgtaaatgacaatccgccg
atcgtcctgtttccgcaatcaaaccagtcttatatgctagtcctacccagcacgttgcct
gggacatctattaccgaagtgtacgccgtggataaagatacaggcatgaacgcagtcatc
gcttatagtatcatcaagcgaaaaggtggcgagccgggatccttcgccatcgacccccaa
actggaaatatcactctaaaacgcgagctaagcaaccggggtttatgcagtttgctggtt
aaagttagtgatcacggacaacccgaaccactctactcaaccgtcatggtaaactttttt
gtgaatgaaactgtgagcaatgagagctacatccaaagcttgctaaccagggaggcagac
atagaagtcgaggaaaaaccctggtttattggtcaaatgaaggacggacctgaaagatac
gagctgtttccttgccagccagttctcatcgctctatctgcaacatgtctagggctgttt
cttttagtagtcatgctaacatcgtatatttgctgtaaaaggtttaaaagacatcggaag
aagaaaaaatcggagactgaaataccactgaaaatgactcatggatcggtgcatgttgtg
aacagaaaaatcaggcaaatctcaaatctttga
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