Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110173190
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Entry
110173190 CDS
T05002
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04510
Focal adhesion
bpec04512
ECM-receptor interaction
bpec04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110173190 (col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110173190 (col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110173190 (col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpec04147
]
110173190 (col4a2)
00536 Glycosaminoglycan binding proteins [BR:
bpec00536
]
110173190 (col4a2)
Exosome [BR:
bpec04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
110173190 (col4a2)
Glycosaminoglycan binding proteins [BR:
bpec00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110173190 (col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
110173190
NCBI-ProteinID:
XP_020794838
LinkDB
All DBs
Position
Unknown
AA seq
1670 aa
AA seq
DB search
MQAQHTGVRQLLMLIVCLSIFASGVLAGGKKQSGPCGGRDCSGGCQCFPEKGARGSPGPL
GPQGPQGPPGRPGDQGIEGHKGQKGDRGQGGIMGLKGSVGMTGVPGFSGNDGIPGHPGQA
GPRGKPGADGCNGTQGDTGRSGQPGYNGVPGIPGTPGRKGEKGDSLELSVFMERFRGDPG
TPGLNGIFGPVGNPGWPGSKGILGPKGPPGPPGPRGPKGTMTKVFKGVKGEPGETGPPGY
PGNSTHQQKQPEDAPSGPQGEKGLKGERGDQADNRGETGVMGFPGSRGPPGVNGLPGLRG
EPGDPGQSGKVGPKGDRGEAGELISSGSVWPWGQSAGPPGPAGEQGPQGERGLTGDPGIP
GPPGLPAFDTQQHVFDFSGPFGERGDPGDRGQIGEEGVHAKEPGPKGKPGRPGEKGEPGP
LGSLSDYFKGSPGGRGRPGNAGLKGLKGDHGECQCSSDNSPPGPQGPAGEQGDPGMTGEF
GREGDIGDPGLRGDDGLPGFPGVNGEPGPQGRKGDPFVATVKGQSGDPGDTGINGESGAI
GAPGPNGLPGFPGSRGFPGEGPRGEYGEKGFPGRRGQPGTPGLRGEPGQVLGGVKGQRGL
PGDDGIPGYSGVAGTPGTPGGCSPTADGEQLDVTGLCETIPGPPGLPGPPGGHGLPGLHG
PQGQKGPSGLFGPLGVKGEQGDQGRGGSPGPPGFPGPRGEHGHSGMKGTVGNPGMSGKPG
RYGTQGEKGAHGDILGAMPGSPGEQGPPGPLGEKGQTGEEGGPGYTGMIGMPGMIGFKGE
TGPSGLQGEEGRPGPAGKYGYPGDNGSVGLPGARGTIGLPGFTGERGTEGDPGPPGPVGL
KGIPGEFGEVGFTGHDGLQGDPGSHGSHGQPGLPGIKGYKGSPGMAGFEGRRGNAGEKGL
LGVKGDIGVSGESGPKGLAGFKGEKGARGLDGPPGKKPQIPQIIIVTMKGLKGDRGNFGN
YGFTGQRGSKGFPGVPGMEGHPGLPGDPSHEKGHQGNPGAQGLPGIKGMPGVPGNRGIPG
FEGMPGDKGIKGTTGAYGATGDKGIKGIKGLAGARIDLPGSPGLRGEFGLPGEPGEKGLT
GNPGIRGTPGFDGIDGRHGFRGDGGDTGPQGLDGQKGTPGKQGLKGSQGLPGKEGLPGFP
GHTGNKGFPGLKGLYGLHGLKGQKGLPGTPGFDNYGPDGETGLTGPKGENGEPNHERGLP
GKEGLQGSRGLVGDPGQPGPPGPRGLGGPDGTAERKGSFGDIGSKGLRGYEGFPGVRGLP
GASAAPGEKGVTGPNGFPGVQGFKGFKGDQGSPGYKGPNGISGRKGVKGDQGVMGIPGVM
GLKGERGPAGPKGNTGIPGPPGPEGDQGPAPLPVKVPGERGPPGPPGFPGPQGVKGDAGQ
QGTPGDAGYIGAAGVKGMPGISGRPGTPGFRGELGPEGHPGLQGMEGSRGRPGISGLPGM
PGRSVSVGYLLVKHSQTDHTPMCPVGMTKLWDGYSLLYFEGQEKAHNQDLGLAGSCLPKF
STMPFLYCNPGDLCYYASRNDKSYWLSTTAPLPMMPVEEEDIRPYISRCSVCEAPSVAIA
VHSQDITIPQCPVGWRSLWIGYSFLMHTAAGNEGGGQSLSSPGSCLEDFRTTPFIECNGA
KGTCHYFANKHSFWLTSIDQSFHSEPSAETLKAGQLLSRISRCQVCMKNL
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcacaacacaccggtgtgagacagctgctgatgctgatcgtctgtctctccatt
ttcgcctcaggagttctcgcaggcgggaagaagcagagcggcccgtgtggaggaagagac
tgcagcggaggatgtcagtgcttcccagagaagggtgccaggggttcacctgggcccctg
ggtccacaggggccccaggggcctccagggcgaccaggggaccaaggcatcgagggccac
aaaggacagaagggggaccgaggacaaggggggatcatgggccttaaaggcagtgtggga
atgactggtgtccctggtttctctggaaatgatggaatacctggccacccaggacaagct
ggacccagaggaaagcctggagcagacggctgtaatggaactcaaggagacacaggacgt
tcaggacagcccggctacaatggggtccctggtatacctgggactccaggaagaaaggga
gagaagggagactcactagagctgagtgtcttcatggaacgcttcaggggagatccaggc
accccaggactcaatgggatttttggacctgttggaaatcctggttggcctggaagcaaa
ggtattcttggtccaaagggccctccaggccctcccgggccccgcggtccaaagggcaca
atgaccaaagtcttcaaaggagtcaaaggagagccaggggagacagggcctcctgggtat
ccaggaaactctactcatcagcaaaaacaaccagaggatgccccatctggaccccaaggt
gaaaaaggcctcaaaggtgaaagaggagatcaggctgataacagaggagaaactggtgtc
atggggttccctggctcgcggggccctcctggtgtcaatgggcttcctggactaaggggg
gagccaggtgatccaggtcaaagtggcaaagttggtccaaagggagacagaggtgaagct
ggagagctcatctcatctggatctgtgtggccctgggggcaatcagctggtccacctggc
cctgccggtgaacagggaccacaaggagagaggggcctgactggtgaccctggtattcct
ggacccccaggacttcctgcttttgatacacaacaacatgtgtttgattttagtggtcca
tttggtgagaggggggaccctggagacagaggtcagataggagaagaaggtgtccacgca
aaagaaccaggacccaaaggcaaaccaggtcgaccaggagaaaagggcgagcctggaccc
ctgggatcattgagcgactactttaaaggatctcctggaggaagaggacggccaggaaac
gcaggactgaagggactcaaaggtgaccatggagaatgtcagtgcagctctgataactca
cctcctggaccccaggggccagctggagagcagggagaccctggcatgacaggagagttt
ggccgagagggggacattggagacccaggtctcaggggggatgatggattacctggattt
cctggtgtcaatggtgagccagggcctcaaggcagaaaaggtgatccgtttgtggccaca
gtgaaaggacagagtggtgatccaggtgacacaggtatcaacggtgagtctggcgcaata
ggggctccaggtccaaatggactccctggttttcctgggagtcgtggttttcctggagag
ggtcctagaggagaatatggagaaaagggatttcctggtcggaggggacaacctggtact
ccagggctgagaggagaaccagggcaagtcctcggtggggtcaaaggtcagcggggctta
cctggagatgacggcatcccagggtattctggagttgcaggaacacctggtacaccaggc
ggctgtagtcccacagcagacggagaacagttggatgtaacaggtctctgtgaaaccatc
cctggaccccctgggttacctggaccccctggaggtcacggacttcctggtttacatgga
cctcaaggccaaaaaggaccctctggattatttggaccactaggagtaaaaggagagcag
ggtgatcaaggcagaggaggcagccccggacctccaggttttccaggcccacggggcgag
catgggcattctggaatgaaaggcactgtggggaacccagggatgtcaggtaaacctgga
cggtatgggacccagggagaaaagggtgctcatggagacatcctcggagcaatgcctggt
tccccaggtgagcagggaccccctggcccactgggagaaaaaggccaaactggagaggaa
ggggggccgggatacacagggatgattgggatgcccgggatgattggcttcaagggagag
acaggtccttctggcctgcagggtgaggagggcagacctggaccagcggggaagtatggc
tatcctggtgataatggcagtgtaggcctgcctggtgcacgagggaccataggactgcca
ggcttcactggggagaggggaacagagggtgaccctggccccccagggccagtggggctg
aagggtatcccaggggagtttggtgaagtgggcttcactggacatgatggtctgcaagga
gatccaggatctcatggttcacatggtcagccaggtcttccaggaattaaaggttacaag
ggttctccagggatggcaggatttgaaggtcgcaggggtaatgctggtgaaaagggtctc
cttggggtcaaaggagatattggggtgtcgggtgaaagtggtcctaaaggacttgcaggc
ttcaaaggagagaaaggggctcgaggtcttgacggcccacctggaaagaagcctcagatc
ccccaaattataattgttactatgaaaggcctcaaaggagaccgtggaaattttggaaat
tatggttttactgggcaaagaggttcaaaaggatttccaggcgtcccgggaatggaggga
catcccggtttacccggagaccccagccacgaaaaaggacaccaaggaaacccaggtgct
cagggacttccgggaataaaaggaatgccaggtgtccccggaaatagaggaattcctggg
tttgaaggaatgcctggtgataagggcattaaaggaactacaggagcctatggtgcaacg
ggagacaaaggaatcaaaggaattaaaggactcgctggagctcgtatagatctgccagga
tctccaggactcagaggagaatttggtttgcccggagagccaggtgaaaaggggttgact
ggaaacccaggaatcaggggcacccctggatttgatggtattgacggaagacatgggttt
agaggagatgggggagacactggcccccaaggtttagacggacagaagggaacccctggc
aaacaaggactaaaaggttcacagggattaccaggaaaagaaggtctccctggctttcct
ggtcacacagggaacaaaggttttccaggcctgaaggggctttatggattacatggactg
aaaggacaaaagggtctccccggcaccccaggatttgataactatggaccagatggagaa
acagggctgacaggtccaaaaggagagaatggtgaacccaaccatgagagaggtcttcca
ggaaaagagggtttacagggctcaagaggccttgttggtgacccgggccaaccaggacca
ccaggacctaggggtctggggggaccagacggcacagctgagagaaaaggttcatttgga
gatattggctccaagggccttagaggatatgaaggtttccctggtgtgagaggtctccct
ggtgccagtgcagcccctggagagaaaggagtgaccggaccaaatggatttccaggagtc
caaggatttaaaggatttaagggagaccaaggttcaccggggtacaaagggcccaatggt
atttcaggaagaaaaggagttaaaggagatcagggcgtgatggggattcctggtgtaatg
ggcctaaaaggtgaacgaggaccagcagggccaaaaggaaacacaggaatcccaggtcct
cctggacctgagggtgatcaagggcctgccccgctaccagtcaaagttccaggtgaaaga
ggtcctccagggccacctggctttccgggaccacagggagtcaaaggagatgccggtcaa
cagggtacccctggagatgcagggtatattggtgctgctggtgtaaaggggatgcctggt
attagtggccgtcctggtacacctggttttcgtggagagcttggtccagaaggacaccct
ggtttacaaggaatggaaggctcccgtggcagacctggcatctcgggtttacctggcatg
cccggccgtagtgtgagtgttggctacctgctggtgaaacacagtcagactgaccacaca
cctatgtgtcctgtggggatgaccaagctctgggatggatacagtcttctgtactttgaa
ggccaggaaaaggctcacaaccaggatcttggtttggctggatcttgtctaccaaagttc
agcactatgcccttcctgtattgtaatcctggagatttatgttactacgccagcagaaat
gacaagtcctactggctctcgacaactgctcctcttcccatgatgccggtggaggaggag
gacatcaggccttacattagccgctgttcagtctgcgaggctccctctgtggccatagct
gtccacagtcaggacatcaccatcccacagtgtccagttggatggcgtagtttatggatt
ggatactcttttctcatgcacaccgcagctggaaatgaaggtggagggcagtcgttgtca
tctcctggctcctgtctggaggacttcaggaccacaccgttcattgagtgcaatggggcc
aaaggcacatgtcactactttgctaacaagcacagtttttggctaacatccatagaccag
tccttccacagtgaaccttcagcagagacactaaaagctggccagctcctgtcccgcatc
agccgctgccaagtctgcatgaagaacttgtaa
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integrated database retrieval system
