Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110173831
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Entry
110173831 CDS
T05002
Symbol
col17a1
Name
(RefSeq) collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110173831 (col17a1)
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GFIT
Motif
Pfam:
Collagen
LapA_dom
Motif
Other DBs
NCBI-GeneID:
110173831
NCBI-ProteinID:
XP_020795496
LinkDB
All DBs
Position
Unknown
AA seq
1464 aa
AA seq
DB search
MANGSITRPGEFSSGSGASGASRALLSGDSSSSTSSVLLTSSSTSSSSGSAGAAGGASAG
VLSISSGGGASFASGGGASAGVRAAGGSSYASSGFVSSSSSSNGGGAGSSVTKSYSSGVE
TKKLSTGGTMSPGGALSSGGTLSTGGALSTGGALSSGGSYSASAIESKSTLTATVSDVFD
ESSSTNSSPEYNRKDYNMTSTTTTMATRGRSQSRESEIRTRLQSSSPPGTWTELDDVKRL
LRGNRSTSISPPRSPNNTLPIPKKASVETRTLSESSGGDQYGSIWTGTAGGSYGYNANLT
NNNLSATSTMYQSGVQNNMAIGAPSAGGGLSLSSTVPIYGVQNNLAGTGPLLSPTATGPI
VYGVQKNVSSSGLSPTTVRPGSPIKDESTTRDFKFVFVEKENAPVKKETEGLIMAKDTGK
SFMSSGPSSLTEGYSEDSLKREKQKLSTSTMEEGTDTKSGSLKTSTKDKATYAEIRKEDA
ALAFCSCCSWWKWLLGLLLCLLFLLGLLFGLIALGEEVKRLKERVDTLEAITGSASSART
SRLSSSGINIIDPLDTAYIDRSSAGNTLTPGHDSFALQRTVQQLIRAELRSDIVRESLRG
AKGDPGPRGETGAMGHKGENGFPGLPGPPGQMGHSGLEGPRGAKGSEGEPGPEGPPGQRG
REGPMGPRGETGPPGFGQKGEKGSAGEPGRPGAVGSPGPVGPKGSMGEQGAPGSPGAPGV
KGFAGEAGAPGAKGDRGTPGAPGTKGDQGERGPRGPAGEPGQPGTPGPAGPKGTKGVGGE
PGSMGLPGARGPPGLPGDIGPPGITGIQGPPGVAGIPGQPGAKGEPGSPGKVITTAAGSE
TVAIPGPPGPAGPAGPAGAPGLSGPTGPAGAPGEPGEKGEPGEKGEKGEKGEKGEQGEKG
EKGEKGESGEPNLGSAAGPPGPPGPPGPPGPPGEVGPQGPPGEGKPGPPGRKGPPGPPGI
GTPGPKGDQGEPGSFVPTSETFFAGPPGPPGPPGPPGSEGPVGEPGSQGEPGQPGLPGSP
GEQGEPGHGFPGQPGSPGPQGPEGPPGPPAPEPPPGAPGAPGPPGPPGPPGQDGSDSADV
SQAVAELLQSDGIRQYLSGPPGPPGAPGVPGVPGSPGDGQMEDITNRILSYIQSTGPPGA
VSLNDVIAIMQRDDVRRYIAGPPGPPGAPGAPGGGDYSFNTAELAERVLALINEHGLAGV
PGPPGPPGVPGLPGSFNALVGPQGPPGIPGSPGPVGPPGPIGPPGAPGQANYINSDIRDY
LQSVAFRGPRGPPGPPGPPGPVGPPGPYSGLISYAEHANRDGPRAELQDFKKTVDSSGVP
MFGLPGLPGPPGPPGNKGEPGDSGDYASMALRVTDYIKTHGVFRDVLNEHNSRFHKGPPG
PPGPPGPPGHSHVFGSDSNVTDLVEYIKVYGAIVGRPGPKGDMGIPGPKGERGDPGPPGP
EGPRGQKGEYSLAIKRKRRSLRGV
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggccaatggctccataacaagaccaggtgagttctcatctgggtctggagcttctgga
gcttccagggctctcctgtccggagattctagcagcagcaccagctctgtcctgctcaca
tcctcctctaccagcagcagcagtggctcagcaggggcagcagggggcgccagtgcagga
gtgctctccatctcctcggggggcggggcttcgtttgcttcagggggcggggcttcagca
ggtgtacgggctgcagggggatcgtcctatgcatcctccgggtttgtgagcagcagcagc
agcagcaatggagggggggcagggtcctcggtcaccaagagctacagctctggagttgag
accaagaaactgtccacagggggcacaatgtcccctgggggtgcactgtccagtggaggc
acactgtccactgggggtgcattgtccactgggggcgctctgtcctctgggggctcgtac
tctgcttcagccatagagagcaagagcactctgaccgccactgtgtcggacgtgttcgat
gagagttcaagcaccaattcctcccctgagtacaacaggaaagactacaacatgaccagt
acaaccacgactatggccactagagggcggtcacagagccgagagagtgaaatcaggaca
aggcttcagagttcttctccacctggaacatggactgagttggacgatgtgaagcgtttg
ctaagaggaaaccgctcaaccagcattagcccccctcgctcccccaacaacacgctcccc
atccccaagaaggccagtgtggagaccaggaccctgtctgagagctccggcggagatcag
tatggcagcatatggactggcacagcgggtggaagctatggctacaatgctaacctcacc
aacaacaacctgtcggctacttccaccatgtaccagtcaggggttcagaacaacatggcg
attggagcaccctctgctggaggtggactgtcactgagcagcacggtacccatctatgga
gttcaaaataatctggctggtacgggtccgctgctgtctcccactgccactggaccaata
gtttatggtgttcagaagaatgtatcaagtagtggcctgagtccaactacagtgagaccc
ggcagtcccattaaagatgaatcaaccaccagagattttaagtttgtgtttgtggagaaa
gaaaacgctccagtgaagaaagagacagaggggctgatcatggccaaagacacaggaaag
agttttatgtcctctggtccttcaagtctcactgaaggctattctgaggattcactgaag
agggagaaacagaagttgtccacaagcacaatggaggaaggaacggacacaaaatctgga
agcctcaagacgtcaacaaaagataaagctacttatgcagagatccgtaaagaagacgct
gcccttgcattctgctcatgttgtagttggtggaagtggttgctgggtctgctgctgtgt
ctgctgttccttcttggacttctgtttggactcattgcattaggtgaagaggtcaaacgc
cttaaagagcgtgttgacactctagaggccatcactggtagtgcatcctctgcccgcacc
agccgcctttcctcctctggaataaacatcatcgaccctctggacacagcctacattgac
aggagctctgcaggaaacactctgaccccaggacatgacagcttcgccctccaacggacc
gtacagcagctgatcagggctgaactccgatcagacatagtgagagaatcactaagaggg
gcaaagggagatcctggtcccagaggtgagacaggagctatgggacataaaggtgaaaat
ggcttcccaggtctaccgggacctccagggcagatgggccactctggactggagggacca
cgaggagcaaagggcagtgaaggtgaacctgggccagaggggcctccaggacagaggggc
cgagagggtccgatgggccccagaggagagactggtcctcctgggtttgggcagaaagga
gaaaaaggatccgcaggagagcctggtcgtcctggtgctgtcggaagtcctgggcctgtg
ggacccaaaggatcaatgggagagcaaggagctccaggaagcccaggtgccccaggtgtg
aagggttttgccggtgaagcaggtgctccaggagccaaaggtgatcggggaactcctggg
gctccaggaaccaaaggagaccaaggagaaaggggtccacgtggaccagcaggtgaacca
gggcagccaggaacccctggtccagctgggccaaagggaaccaaaggagttggaggtgag
ccaggctccatgggactgcctggtgcaaggggaccacctggacttcctggagatattgga
cctccaggaattacaggcattcaaggtccaccaggtgttgctggtattcctggtcaacct
ggagctaaaggagaacctggttcacctgggaaagttatcactaccgcagccggctctgag
actgtggcgatccctggcccccccggccctgctgggcctgctggtcccgctggggcccca
ggtctgtcaggtcccaccggtccagctggagcccctggagagcctggagagaaaggggaa
ccgggcgagaagggagagaagggagaaaaaggtgaaaaaggagaacaaggagaaaaagga
gagaagggagagaaaggagagagtggagagcccaaccttggctctgctgctgggcctcca
gggccacctggtcctcctggaccaccaggaccacccggagaagttggaccacagggtcca
cctggtgaaggtaaacctggtcctccaggacgcaaaggtcctccaggccctcctggtatc
ggcacacctggacctaaaggtgaccaaggagaacctggcagctttgtgcctacgtcagag
actttctttgcaggaccaccaggacccccagggccaccagggcccccaggctcagagggc
ccagtaggtgaaccagggtcccaaggagaaccaggtcaaccaggacttcctggaagtcct
ggagaacaaggagaaccaggacacggtttcccaggtcagcctggatcacccgggccccaa
ggaccagagggccctcctggaccaccagctcctgaacccccaccgggagctccaggtgcc
cccggcccccccgggccccctggtcctccaggacaagatggcagtgactctgcagatgtg
agccaggctgttgcagagttactacagagtgatggtataaggcagtacctgtctggtccc
ccaggacccccaggagccccaggtgtcccaggtgtcccgggctctccaggagatgggcag
atggaagacataaccaacagaatcctcagctacattcaaagtaccggacctccaggagca
gtctctcttaatgacgtcattgctatcatgcaaagagatgatgtgaggagatacattgca
ggtcctcctggcccaccaggcgctcccggggctcctggaggtggagattactcttttaac
acagccgagcttgcagagagagttcttgctcttataaacgaacacgggctggcaggtgtc
ccgggacctccaggaccccccggagttcctgggcttcctggaagctttaatgctcttgta
ggcccacaaggacctcctggaatcccaggatctccaggaccagtgggaccccctggaccc
ataggaccacctggagctccaggacaggccaactacatcaacagtgacatccgtgactac
ctgcagagtgttgccttcaggggtcctagaggcccccccggcccccctggacccccagga
ccagtgggacctcccgggccttatagtggactgatttcatacgcggagcatgcaaacaga
gatggccccagagctgaactgcaggacttcaaaaagacagttgacagttcgggagtacct
atgttcgggctccctggtctgcctggaccaccaggaccgccgggaaacaaaggagagcca
ggcgatagcggtgactatgccagtatggccctcagagtgacagattacattaaaactcat
ggagttttcagggatgtgttaaatgagcacaacagtcgcttccataaaggccccccgggg
cccccaggcccccccggacccccgggccacagccacgtgttcggttctgactcaaacgtt
acagatttagtggagtacatcaaagtgtatggggccattgtggggagaccaggacccaaa
ggagatatggggatcccgggaccaaagggagaaagaggtgatccaggacctcctgggcct
gagggacccagaggtcaaaaaggagagtattcactcgcaatcaaacgaaagaggcggagt
ctcagaggagtttaa
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