KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110173859
Entry
110173859         CDS       T05002                                 
Name
(RefSeq) aly/REF export factor 2-like
  KO
K12881  THO complex subunit 4
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03013  Nucleocytoplasmic transport
bpec03015  mRNA surveillance pathway
bpec03040  Spliceosome
bpec05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110173859
  09122 Translation
   03013 Nucleocytoplasmic transport
    110173859
   03015 mRNA surveillance pathway
    110173859
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110173859
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpec03019]
    110173859
   03041 Spliceosome [BR:bpec03041]
    110173859
Messenger RNA biogenesis [BR:bpec03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110173859
    TREX complex
     110173859
Spliceosome [BR:bpec03041]
 Complex C
  Other components
   EJC/TREX
    110173859
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110173859
SSDB
Motif
Pfam: RRM_1 FoP_duplication FYTT RRM_occluded RRM_3
Other DBs
NCBI-GeneID: 110173859
NCBI-ProteinID: XP_020795525
LinkDB
Position
Unknown
AA seq 247 aa
MSDKINMSLDDIIKLNKKGGSGGGGRRGPSKVPQRGSSGRTGGRPNNTFRRNNRPAPYTR
PRELPDKWQHDKFEESFGGSRRQVSAGRAVESGCKLLISNLDFGVSESDIQELFADFGEL
KKASVHYDQSGRSKGTAEVIFVDKADALKAMKQYNGVPLDGRPMKIQHVVEAQEERVASR
GFDRSRLGQAKFERPERRRGGGGGTGRRGGGSSSRGGGRSEKKPQLSAEELDAQLDEYNA
KFQMDTS
NT seq 744 nt   +upstreamnt  +downstreamnt
atgtccgacaaaataaacatgtccttggatgacattatcaagctaaataagaaaggaggc
tctggaggaggtgggcgccgcggaccgtccaaagtaccacagcggggaagttcagggcga
accggcggccgaccgaacaacactttcaggcggaacaacaggcccgcaccgtacacaagg
ccaagagaactaccagacaaatggcagcatgacaaatttgaagaaagttttggtggctcg
aggagacaagtttctgcaggaagagctgtggagagtggctgcaaactgctcatttccaat
ctagactttggtgtttctgaatcagatatccaggagctttttgcagactttggggagctg
aaaaaagcatcagtacattatgaccaatctggaaggagtaaaggaacagcagaagtcatc
tttgtagataaagcagatgccttaaaagcaatgaagcagtacaatggcgtcccacttgac
ggtcgaccaatgaaaatccagcatgtggtggaggcacaagaagaaagagttgcatcaaga
ggctttgacagaagcagactcgggcaggcaaaatttgagaggcctgagaggaggcgaggt
ggtggtggaggaactggtcgtcgcggaggtggcagtagcagcagaggtggaggacgcagt
gagaaaaaaccacaactttcagcagaagagctcgatgcccagttggatgagtacaatgcc
aagttccagatggacaccagctaa

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