Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110173859
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Entry
110173859 CDS
T05002
Name
(RefSeq) aly/REF export factor 2-like
KO
K12881
THO complex subunit 4
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03013
Nucleocytoplasmic transport
bpec03015
mRNA surveillance pathway
bpec03040
Spliceosome
bpec05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110173859
09122 Translation
03013 Nucleocytoplasmic transport
110173859
03015 mRNA surveillance pathway
110173859
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110173859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110173859
03041 Spliceosome [BR:
bpec03041
]
110173859
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110173859
TREX complex
110173859
Spliceosome [BR:
bpec03041
]
Complex C
Other components
EJC/TREX
110173859
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110173859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
FYTT
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
110173859
NCBI-ProteinID:
XP_020795525
LinkDB
All DBs
Position
Unknown
AA seq
247 aa
AA seq
DB search
MSDKINMSLDDIIKLNKKGGSGGGGRRGPSKVPQRGSSGRTGGRPNNTFRRNNRPAPYTR
PRELPDKWQHDKFEESFGGSRRQVSAGRAVESGCKLLISNLDFGVSESDIQELFADFGEL
KKASVHYDQSGRSKGTAEVIFVDKADALKAMKQYNGVPLDGRPMKIQHVVEAQEERVASR
GFDRSRLGQAKFERPERRRGGGGGTGRRGGGSSSRGGGRSEKKPQLSAEELDAQLDEYNA
KFQMDTS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaaaataaacatgtccttggatgacattatcaagctaaataagaaaggaggc
tctggaggaggtgggcgccgcggaccgtccaaagtaccacagcggggaagttcagggcga
accggcggccgaccgaacaacactttcaggcggaacaacaggcccgcaccgtacacaagg
ccaagagaactaccagacaaatggcagcatgacaaatttgaagaaagttttggtggctcg
aggagacaagtttctgcaggaagagctgtggagagtggctgcaaactgctcatttccaat
ctagactttggtgtttctgaatcagatatccaggagctttttgcagactttggggagctg
aaaaaagcatcagtacattatgaccaatctggaaggagtaaaggaacagcagaagtcatc
tttgtagataaagcagatgccttaaaagcaatgaagcagtacaatggcgtcccacttgac
ggtcgaccaatgaaaatccagcatgtggtggaggcacaagaagaaagagttgcatcaaga
ggctttgacagaagcagactcgggcaggcaaaatttgagaggcctgagaggaggcgaggt
ggtggtggaggaactggtcgtcgcggaggtggcagtagcagcagaggtggaggacgcagt
gagaaaaaaccacaactttcagcagaagagctcgatgcccagttggatgagtacaatgcc
aagttccagatggacaccagctaa
DBGET
integrated database retrieval system