Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110174042
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Entry
110174042 CDS
T05002
Symbol
polrmt
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
bpec03029
]
110174042 (polrmt)
Enzymes [BR:
bpec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110174042 (polrmt)
Mitochondrial biogenesis [BR:
bpec03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
110174042 (polrmt)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Sgf11
Mitofilin
Motif
Other DBs
NCBI-GeneID:
110174042
NCBI-ProteinID:
XP_020795734
LinkDB
All DBs
Position
Unknown
AA seq
1313 aa
AA seq
DB search
MSLLRVCAFTKCVKISRFLLEKCSVRNSPENYCPLCLRNCASRRFTEHYLHLQRRNISFL
IPKTDDNKKRLLEQSLVDVLEARIQQLQSDVVDVQHAKVQFVSAPSSGTGPLSGKSPKSQ
PQAKADQPKPRSKSQPSRWMEKLSQEKKKKLKEEQNLQQKIQMKNMKVSKGSQMLPGTSH
KIISTTAKKTAASKKKPNKHMKLSEEIHSAVSSTSTTVVRTAALSRKVYKRNANCLVNIA
VDKGGSTNCTAEIEGRANALVQAEELEKTLNARSSSNTHITEGLLDNSTYAVELQQSISS
YLEACVFMGDIDRAHHFLLSQHRGMSRRKHLNTDIYNIMMRVWAKKGTLSHIGRIFILLE
EAGLKANLGSYCAALECMGRNPSCSPQVIIRCLNQMEEDGFSVDDLFSQCLFRQDERDMV
MNAIHVVQPEYQPNVNPDGKQQYPSLVEDFYTQRAEHRYPKLHFTKQQLQERFHQQLSME
RACTVTVDSVEAAKPVTENMDKMRKLLSELRTHWHKTLLQALKENKMILANTNSKGYRLN
IYPYLCLLDDSDYVDIMVQSVANMPPSGESLRVVARDLGSRVYNKYSVKQKQQYHMVQKM
TSIYSSYTDILAKDTEAYSVLPRERWCELEAENMVGPTLRGTETNWPYALTLELGTYLVD
LMVKNLKINSDILNPACDRKLIPILYHMYTFRSTKQVGFIKPHPILTXXXXXXXXTKLTF
DSYVIPMLCPPVPWTSVKFGAYLLTPTKLMRTIDGATQHESLLERSQNLQPIMDSLNQLG
NCAWKVNKPLLDIIILIFNDKGNDKLDIPPPMSEAPKIPSFNPQDPSYTSTEKAQMKREV
VIAKKKCGEMHSLRTDALYKLSIANYIRDEVFWFPHSMDFRGRTYPCPPYFNHLGSDVTR
AILLFAEGKPLGPKGLDWLKIHLVNLTGLKKRNSLQERLEYANSIMEDILDSADNPLNGR
SWWMNADEPWQALACCMEIANAVRSPDPEQFISHFPVHQDGSCNGLQHYAALGRDVIGAT
SVNLMPCDLPQDVYSGVAQQVEELRARDAEKGLKIAQVLEGFISRKVVKQTVMTVVYGVT
RYGGRLQIEKRLKEIDDFPKEYVWDASHYLVRLVFSGLKEMFTGTREIQDWLTESARLIS
KSGHSVEWLTPLGLPIIQPYHRKRSQLVKSTMQHINLQISHDTKERPDTVKQKNAFPPNF
IHSLDSTHMMLTSLHCHSAGLTFVSVHDCYWTHALTVDTMNKICREQFVALHSQPILQDL
SNFLLQKYCAGPMTEAKNNKYQEYRRLMMLLAKVPQTGDFDLELVKDSTFFFS
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttctcagagtgtgtgcctttaccaaatgtgtgaagattagccgttttttgttg
gaaaagtgttctgtccgaaactctccagagaactattgtcctctgtgcctaagaaactgc
gcctcgagacgatttacagagcactatctgcacctgcaaagaagaaatatatcatttctg
attcccaagacagatgacaacaagaaacgtttgctggaacagtctctagttgatgttctt
gaagccagaatccagcagcttcagtctgatgttgtagatgtccaacatgcaaaagtgcag
tttgtctctgctccctcctctggaacaggaccattatctggtaaaagtccaaaaagccaa
cctcaggccaaagcagaccaacccaaaccaagatcaaaatcacagcccagtcgttggatg
gagaaactctctcaagaaaagaaaaaaaaacttaaggaagaacaaaatctacaacagaaa
atccagatgaagaacatgaaagtgagcaaaggcagccaaatgcttcctggaacctcccat
aaaatcatttctaccacagctaaaaagactgcagcttcaaagaagaaacctaacaaacac
atgaaactgtctgaagaaattcactcagcagtctcttcaacctccaccactgtagttaga
actgctgccttgtcacgaaaggtttacaaaaggaatgcaaactgtttagtcaatatagct
gtagataaaggaggctcaactaactgtacagcagaaattgaggggagagcaaatgcactg
gtgcaggcagaagagttggagaaaacactcaatgcacggtcctcctcaaatacacatata
acagagggactattggataatagtacgtacgctgtagagctccagcagagcatcagctcg
tacttggaggcctgcgtgtttatgggggacattgatcgcgcacatcacttcctgctcagt
caacacagaggaatgagcaggcggaagcatctcaatacagacatctataacattatgatg
agggtttgggccaaaaagggcacactgagtcatattggccgcatatttattttgctggaa
gaggcgggtctaaaggcaaacctgggatcctactgcgcagcattggaatgtatgggacgc
aatccaagctgctcgccacaagttattattaggtgcctgaaccagatggaggaggatgga
ttttcagtggatgacttgtttagtcagtgtctgttcagacaggatgagagggacatggtt
atgaacgccattcatgtagtccagcctgaataccagccaaacgttaacccagacggaaag
cagcagtacccctcactggtggaggacttctacacgcagagggcggagcatcgctatccc
aaactgcacttcaccaagcaacagctccaggagcggtttcaccagcagctcagcatggag
cgggcctgcaccgtcactgttgactctgtggaggcagccaaacccgtcactgaaaacatg
gacaaaatgaggaagttgctgtcagagctgaggacacattggcacaaaacactgcttcag
gctttgaaggagaacaagatgatccttgcaaacaccaactccaaaggctacagactcaac
atctatccttacctgtgtctcctggacgacagcgactacgtggacatcatggtgcagagt
gttgccaacatgccacccagtggggagtccctcagggttgtggcccgtgacctgggcagc
agagtctacaacaagtactctgtgaagcagaagcaacagtatcacatggtgcagaagatg
accagcatttacagctcgtacacagacattttagccaaggacactgaggcgtacagtgtc
cttcccagagagcgctggtgtgagctggaggcagagaacatggtgggtcccactctgagg
ggaacagagaccaactggccctacgcactgactctggagctgggcacgtacctggtggat
ctgatggtgaaaaacctcaaaataaacagcgacattttgaaccccgcatgtgaccgaaaa
ctcatccccatcctgtaccacatgtacactttcaggagcaccaaacaggttggcttcatc
aaacctcaccctatcctgacnnnnnnnnnnnnnnnnnnnnnnnnnacaaaattgactttt
gactcctatgtcatcccgatgctatgtcctcccgtgccctggacttcggtcaagtttggg
gcttaccttcttacccccactaaacttatgcgaactatcgatggagccacccagcatgag
tctttgctggaaagaagccagaacctacagcccatcatggattctctcaaccagctgggc
aactgtgcatggaaagtcaataaaccacttttagatattataattttgatttttaacgat
aaagggaatgataaattagatatccctccaccaatgtcagaggccccaaaaatccccagt
ttcaacccccaagatccatcctacacatccactgagaaggcccaaatgaaaagggaggtt
gttattgccaaaaagaaatgcggtgaaatgcacagtttgcgcacagatgcactttataaa
ctttctattgccaactacatacgagatgaggtcttctggttccctcatagcatggacttc
agaggtcggacatacccctgtccaccatattttaaccacttggggagtgatgtgacacgg
gccatccttttgtttgctgaaggaaagcccctcggtcctaaggggctggactggttaaag
atccacttagtcaatctgacaggtctgaagaagaggaactcattgcaagagcggctcgag
tatgccaattctataatggaagatatactggattctgctgacaaccctctgaatggcagg
agctggtggatgaatgcagatgagccgtggcaggctctggcatgctgtatggaaatagcc
aacgcagtgagatcacctgatcctgaacaatttatttctcattttcccgttcaccaggat
ggctcctgtaatgggctgcagcactacgccgctctgggcagagacgttattggtgccaca
tcagtcaaccttatgccctgcgacctgccccaggacgtctacagtggagtagcacagcag
gtggaagagctgcgtgcacgggatgcagagaagggcctaaaaatcgcacaggtcctggag
ggcttcatcagtcggaaggtggtcaagcagacagtgatgactgtggtgtacggggtcacg
cgctacgggggacgcctgcagatcgagaagaggctgaaggagattgatgacttccccaag
gagtatgtgtgggacgcctctcattacctggtgcggctcgtcttcagtggcttaaaagaa
atgtttacaggcacaagagaaattcaggactggctgacggagagtgccaggctcatatca
aagtctggacactctgtggagtggttaactcccctgggattgcccataattcagccatat
catcgcaaacgcagccaattggtgaagagcaccatgcagcacatcaacctgcagatcagc
catgacaccaaagagagaccagacacagtcaaacaaaagaacgcctttcctccaaacttc
atccattctctggactccacacacatgatgctgacgtcactccactgccacagtgctggt
cttacatttgtatctgtgcacgactgctactggacccatgcccttactgtggacaccatg
aacaagatctgtcgggaacagtttgtcgctctgcacagtcaacccatcctccaagacctg
tccaactttctgctccaaaaatattgtgcaggacccatgactgaagccaagaacaataag
taccaggagtacaggaggctgatgatgctgctggccaaagtgccccagacaggtgatttt
gacctggagctggtgaaagactcgacgttcttcttcagctga
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