Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110174122
Help
Entry
110174122 CDS
T05002
Symbol
mex3b
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110174122 (mex3b)
04121 Ubiquitin system [BR:
bpec04121
]
110174122 (mex3b)
Enzymes [BR:
bpec01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110174122 (mex3b)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110174122 (mex3b)
Ubiquitin system [BR:
bpec04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110174122 (mex3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-C3HC4
KH_2
RING_XB3-XBAT31
KH_DEAH11_2nd
Prok-RING_4
zf-RING_UBOX
zf-P11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
110174122
NCBI-ProteinID:
XP_020795835
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MPSSLFATESGSVHHHHHHHQGDALDDQRALQIALDQLSLLGLDNDENGLYDSXXXXXXX
XXTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRREDVAMAR
REIISAAEHFSMIRASRNKNTSVNGSGTPIPGPPNLPGQTTIQVRVPYRVVGLVVGPKGA
TIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGIIELQDDNDF
HANGTDVGFDLHNHASLWSKPGATTMTPSSVRKPFSNYRNDSSSSLGSASTDSYFGNSSS
RMADYSPPSPALSYTANNNNNGNNNNNNINNANGFVYGSDVISPDSTNMAFDSSPTFDPT
PAPPGLLWSQYERGMTPTSTGGSSPTSTSAIFSANNNNNNGRRVSNSGTPQPRLSPPLHS
HTGGTGEHTLARRVRSDPGGGSLSFPSSYSSGIASLPGPHLPGIPCDSSASSSASSSSST
SSGTSRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICERSEPRCPVCHTGVTQAIR
IFS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctgttcgccacagagagcgggagcgtccaccaccaccaccaccaccac
cagggagacgcgctggacgaccaaagggctctgcagatagccttggatcagctctccttg
ctcggcttggacaacgacgagaacggcctctacgacagcnnnnnnnnnnnnnnnnnnnnn
nnnnncacggagtgcgtcccggtgccgagctcggagcatgtggccgagatagtgggcagg
caaggttgcaagatcaaagcactgcgcgccaaaactaacacgtacatcaagacgccggtc
agaggagaggagcctgtgtttgtggtgaccgggcgaagggaggatgtggctatggccagg
agggaaatcatctccgcggcggaacatttttccatgatccgagcttcgaggaacaaaaac
accagcgtgaatgggagcggcacccccatcccgggaccccccaacctgccgggacagacc
accatccaggtccgggtgccttaccgcgtggtggggctggtggtcggcccgaagggtgcg
accatcaagcgcatccagcagcagacgcacacgtacatagtgactcccagcagagacaag
gagcctgttttcgaagtgaccggcatgcccgaaaacgtggaccgcgccagggaagaaatc
gaagcccacatcgccatgagaacgggcggcattatcgaactacaagacgacaacgatttc
cacgccaacgggacagatgttgggttcgatctgcacaaccacgcctccttgtggtccaaa
ccgggcgccaccaccatgacgccatcttcggtgcgtaaacccttctccaactaccgcaac
gactcctcttcctccctgggcagtgcctccacggactcctactttgggaacagcagctcc
cgcatggccgactacagccccccgagccccgcgctgagctacaccgccaacaacaacaac
aacggcaacaacaataacaacaacatcaacaacgccaacgggttcgtctacgggagcgac
gtcatctctccagactcgaccaacatggcgttcgattcgtcgccgacgttcgaccccacc
ccggcccccccaggactcttgtggtcccagtatgagagaggcatgacccccacatcgacc
ggaggaagttctcctacctccacttcagccatattctccgccaataataacaataacaac
gggagacgggtgagcaacagcggcaccccacagcccaggctctcccctcccctccacagc
catacagggggcaccggcgagcacacactagcccgcagagtccgcagtgacccgggcggt
gggtctctcagcttcccctcctcctactccagcggcattgcctctctgcccggaccacac
ctccccggcatcccctgtgattcgtcagcctcttcctccgcctcctcctcctcctcgacg
tcatcgggcacgagcaggaagggcagccgcgattgctccgtgtgcttcgagagcgaggtg
atcgccgccctggtcccgtgcgggcataacctcttctgcatggagtgtgccaaccggatc
tgcgagaggagcgagcccagatgccctgtctgccacactggcgtcactcaggccattcgt
atattttcataa
DBGET
integrated database retrieval system
