KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110174190
Entry
110174190         CDS       T05002                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bpec03041]
    110174190
Spliceosome [BR:bpec03041]
 Complex B
  Other components
   Complex B specific factors
    110174190
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML LisH_TPL Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd Ge1_WD40 WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_SCAP WD40_RFWD3 Beta-prop_BBS7 Beta-prop_VPS8 Beta-prop_WDR75_2nd Beta-prop_IP5PC_F TFIIIC_delta DUF7165 WD_LRWD1 LisH_PAC1 LisH VPS8_N PROPPIN LisH_WDR26 zf_topless
Other DBs
NCBI-GeneID: 110174190
NCBI-ProteinID: XP_020795911
LinkDB
Position
Unknown
AA seq 513 aa
MSLEVESADVIRLIMQYLKENNLHRSLATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLLALLAQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEDEXXXXXXXRQIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCVSFCKDSTQLLSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEASFSPD
GHHVISASSDGTVKVWNVKTTECTNTFKPLGTSAGTDITVNNVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTLTGKLERTL
TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctttggaggtagaatccgcagacgtaatccgtctaataatgcagtacctgaaagag
aacaatcttcatcgcagcttggccacgctgcaggaggaaaccaccgtgtcgctcaacacg
gtggatagcatagagagctttgtggctgacattaacagcggccactgggacactgtgcta
caagccatccagtctctcaagctgcccgataagacccttatagacctctacgaacaggtg
gtgttggaattgatcgagcttagagagctgggcgctgcccgttctcttctcagacaaaca
gaccccatgatcatgttgaagcagacccagcctgagcggtacatacacttggagaacctg
ttggctcgctcctactttgatccaagagaggcatatccagatgggagcagtaaagagaag
aggagagcagccattgctcaggccttggccggagaggtcagtgtggtgccaccatcacgt
ctgctggctctgctggcacagtctctaaagtggcagcagcaccaaggcctgctgcctcca
gggatgaccattgatttgttcagaggaaaagcagcagttaaagatgtggaagatgaannn
nnnnnnnnnnnnnnnnnncgacagattaagtttggccaaaaatcccatgtagagtgctca
cgattctctcccgatggacagtatctggtcactggttctgtggatggctttattgaagtc
tggaacttcactacagggaaaatccgaaaggatttgaagtatcaagcccaggataacttc
atgatgatggatgatgcagtgctttgcatgtgtttcagccgagacacagagatgctagcc
actggagcccaggacgggaagatcaaggtatggaagattcagagtggccagtgcctgagg
cgctttgagcgtgctcacagtaaaggcgtgacatgtgtgagcttctgcaaagacagcact
cagctcctcagtgcttcttttgaccagaccatcagaatccatggtttaaagtcaggaaaa
acactgaaggagttccgtggccacagttcttttgtaaatgaggcatcctttagtcccgat
ggacaccatgtcatcagtgcgtcctctgatggtacggtcaaggtatggaatgtgaagact
acagaatgcaccaacaccttcaaacctttgggcacatcggctggcacagacatcacagtt
aacaatgtgattctgctgcctaagaacccagagcactttgtggtgtgtaatcgctccaat
acagtggtcattatgaacatgcaaggacagatcgtaaggagttttagctctggtaaaaga
gaaggtggagactttgtgtgctgcaccctgtcgcccagaggagagtggatctactgtgtg
ggagaggactttgtgctgtactgcttcagcacgctcactggcaaactggagagaaccctg
actgtccatgagaaagatgtgattggcattgcgcaccatcctcaccagaacctcattgct
acctacagcgaagatggtctgctcaaactgtggaagccttag

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