Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110174260
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Entry
110174260 CDS
T05002
Symbol
zc3h12a
Name
(RefSeq) endoribonuclease ZC3H12A isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110174260 (zc3h12a)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
110174260 (zc3h12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
DUF7495
zf-CCCH
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
110174260
NCBI-ProteinID:
XP_020795985
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MALPCKNPAPDLTKPDGNELQLKVDFFRKLGYSSEDVEAALRKLDLDTDTNAVLGELVRI
GARAAPCISNSENDERSTGFKNSLLPPSWTSGPSRNTPEAVHKKHTDEDLRPIVIDGSNV
AMSHGNKEIFSCRGIQLAVNFFLDRGHNDIKVFVPTWRKEQPRAVAPITDQRILTELENR
GILVFTPSRHVRGKRVVCYDDRYIVQVASESEAVIVSNDTYRDLQGEKPEWKKCIEERLL
MYSFVNDRFMPPDDPLGRHGPTLDNFLRKKPLPIEQKRQLCPYDKKCTYGIKCKFYHPER
TNQSYMSVADELREKAQISSNEPSARSSPKFYLGDADPVKNIQVSENVLLYRDSHGSSQN
HIQLSGEHSQSEWAGQPQLMHSHYYANGSQEYLDSGLGSYDSHSNSHRLWSQQQSMAASG
SRHASVQEKNFCSFMLPLSTGQQPARNMEEHPKYNSFAYPCSIPNKGSLPVHLQYSRAPH
PDQNYWSDPYSCMPQARTSNPGTAHSLHPSSPYSHPQYHLRPPPASTDDPKMELRSRLQA
IFNPKDVDIVMNMFPNLMDPEILAGEILKVKNQKGIFQ
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcactcccttgcaagaatccagctccagacctgacaaaaccagatggcaatgagctt
caactcaaagtggacttcttcagaaaacttggctactcttcagaagacgtggaggctgcc
ctgaggaagctagacctagacactgacaccaacgcggtcctgggagaattggttcggatt
ggggcccgggcagccccctgcatttcaaattcagaaaatgatgagaggagcacagggttc
aagaactctctcctgcctcccagctggacctctggaccttccagaaacacgccagaagct
gtgcacaagaaacatacagatgaggatcttaggcctattgttattgatggcagcaatgtg
gccatgagtcatggcaacaaagagatcttctcgtgtagaggcatccagctggcagtgaac
tttttcctggacagaggtcataatgatataaaagtgtttgttcccacctggcgcaaagag
caaccccgggctgttgcccccattactgatcaacgcatcttgacagagcttgaaaaccgt
ggcatccttgtcttcactccttctcgtcatgtcaggggcaagcgagtggtttgttatgat
gatcgctacattgtccaggtagcgtccgagtccgaggccgtgattgtatccaatgacacc
tatcgtgacctccaaggagaaaaaccggagtggaaaaagtgcattgaagagaggcttctg
atgtactcatttgtgaatgacagattcatgcccccagatgaccctcttggtcgccatggc
cccactcttgacaacttcctcagaaaaaagcccctgcctatagaacagaagagacaactt
tgtccctacgacaaaaagtgcacttacggcatcaaatgcaagttctatcacccagagcgg
accaaccagtcttacatgtctgtggctgatgaactgagagaaaaagcccagatttcctca
aatgaaccaagtgcccgatcatcaccaaagttctatttgggagatgcagatcctgtcaaa
aacatccaggttagtgaaaatgtcctcttgtacagagactctcatgggagcagtcagaat
cacatacaacttagtggggagcacagtcagagtgagtgggcagggcaacctcagctcatg
cacagtcattactatgccaacggctctcaggagtacctggactctggcctgggctcttac
gacagccatagcaactcccaccggctctggtcccaacaacaaagcatggccgcatctgga
tccagacatgcctctgtgcaggagaaaaacttctgttctttcatgcttcccttatccact
ggacagcagcctgccagaaacatggaggaacatcccaaatacaactcctttgcttatccg
tgcagtattccaaataaaggcagcctaccagtccatcttcagtacagcagagcacctcat
cctgaccagaattattggtctgatccgtacagttgcatgccacaagcgaggacaagtaac
ccaggcacagctcattcccttcaccccagcagcccttacagtcacccccagtaccaccta
aggccaccgccagcttccactgatgacccaaagatggaactacgcagtcggttacaagcc
atttttaaccccaaagatgtcgatattgttatgaacatgttcccaaatctaatggaccct
gaaatactggcaggagagatattgaaagtgaagaatcagaagggaattttccaataa
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