Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110174586
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Entry
110174586 CDS
T05002
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110174586 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpec03400
]
110174586 (msh2)
DNA repair and recombination proteins [BR:
bpec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110174586 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
110174586
NCBI-ProteinID:
XP_020796351
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MAVQPKQNLSMDSATETGFLSFYFSMPEKPDTTFRVFDRNDYYTVHGKDATFAAKEVFKT
NGVLKYLGSGNRRLESVVLNKLNFETFVKDLLLVRQYRVEVYRNQSKNSKEQDWKLEYKA
SPGNLTQFEDILFGGGSGAEGCAGVVAVRYATAADGQRVVGVGYVDAAERIMGVCEFPDN
EIFSNLESLLVQISAKECLLPQGECSSEGSKLREVVQRGGILVSDRKRADFSSKDVVQDL
NRLLRAKRGETVASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLKPLELGQYMR
LDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKSKIEERLD
LVESFVCDSELRQTLQDDLLRRVPDLHRLAKKFHRHSATLQDCYRVYQAVSQIPNIISAL
ERNSGGFQVLLEAVFLTPFRDLQNDFVKFQEMVDTTLDMNQVEHHEFLVKPSFDPVLSDL
REKMDDLEQNMQSVLNSAARELGLEAGKTVKLESNAIHGYYLRVTCKEEKSLRNNKKFTT
LDVQKNGVRFTNSKLSSLNEDYTKNREEYEEAQNAIVKEIISIASGYVDPLQTLSDVIAQ
LDAVVSFAVASVSAPVPYVRPRLLGQDGVRRLELVQARHPCMETDADTAFIPNDVSFTEG
ERSFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCERAELSVIDSVLARVGAGDSQVK
GVSTFMSEMLETAAILRSATKNSLIIIDELGRGTSTYDGFGLAWAISEHISSKIDCFCLF
ATHFHELTALANQQPTVHNLHVTALTTQDTLTMLYKVKPGVCDQSFGIHVAELACFPAAV
VAAAKEKASDLEEFQELAAEEEKEEGPESKRRRTDKQAGEGLIMDFLEKVRSLPVSSMDD
AEVKSELQRMKDELASKNNSYISEILKRCVSVK
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagcccaaacagaacctgtccatggacagcgccaccgaaaccggcttcctc
agcttttatttctctatgcccgagaaaccagacacgacattcagagtgtttgaccgtaat
gactactacaccgtgcacggaaaagacgccacgtttgcagcgaaagaagttttcaaaacc
aatggagttctgaagtatctgggctcagggaaccgcaggctggagagtgtggtgctgaat
aaacttaactttgagacttttgtgaaagatctgctgctggtgaggcagtatcgagtggag
gtttacaggaatcagagcaagaacagcaaggagcaggactggaaactagagtacaaggcc
tctccggggaatctgacccagtttgaggacatcttgtttggtggagggtccggagccgag
ggctgtgctggagtggtggcggtacggtatgccacagccgcagacggacaacgtgtggtg
ggcgtgggttacgtggacgcagcggaaaggatcatgggagtctgcgaattccccgacaac
gagatcttctccaacctagagtccctgctggtccagatcagcgctaaagagtgtctcctg
ccccaaggggagtgcagctcagaggggagtaaactcagagaggtggtgcagcgtggtggg
atcctggtgtctgaccggaaaagagcagatttcagcagcaaagacgttgtgcaggatctg
aaccgactgctcagggcaaagagaggagagactgtagccagcaacactctgcctgaactt
gacaaacaggtggccatgtcgtgtctggctgctgtggttcggtttttggagcttctttct
gatgagtccaacttcaattcgttcagtctgaagcctctggagctggggcagtacatgaga
ctggacaacgccgcggtcagagccctcaatctgttccagggctctccagacgacaccagt
ggcgctcactctttggccggtctgttgaataaatgcaggactcctcagggccagcgcctc
gtcaaccagtggatcaaacagcctctgatggacaagtccaagatagaggagaggctggac
ctggtggagagtttcgtgtgcgactcggagctcagacagactcttcaggacgacctcttg
cgtcgcgttcccgatcttcaccgtttggccaaaaagttccaccgtcattcggcgacgctg
caggactgttaccgcgtctaccaggccgtgagccagatccccaacatcatcagtgctctc
gagagaaactcaggaggttttcaagtccttctggaggctgtgtttctgactccattcaga
gatttgcaaaacgacttcgtcaaatttcaagaaatggtcgataccactttggacatgaac
caggtagagcatcacgagttcttggtgaagccttcgtttgacccggtgctgagtgacctg
agggagaaaatggacgacctggagcagaacatgcagagcgttctcaacagcgccgccaga
gagctcggtcttgaagctggtaaaacagtgaagctggagtctaatgccatccatggatat
tacctcagagtcacgtgtaaagaggagaaaagtctgagaaacaacaagaaattcacaact
ctggacgtgcaaaagaacggagtgcgcttcacaaacagtaaactgagctccctgaacgag
gactacaccaaaaaccgtgaggagtacgaggaagcgcagaacgccatcgtcaaggagatc
atcagcatcgcctcaggttacgtggaccctctccagaccctgagtgacgtcatcgctcag
ttggacgccgtggtcagtttcgccgtggcctcggtctccgctcccgtcccgtacgtcagg
ccccgcctcctgggccaagatggcgtccggaggttggagctggtccaggcccgtcacccg
tgcatggagacggacgcggacacggccttcatccccaacgacgtcagcttcaccgaggga
gaaaggagcttctacattatcacaggtccaaatatgggcggtaagtccacgttcatccgt
caggtgggcgtgatcgcgctcatggctcagatcggctgcttcgtcccgtgcgagagggcg
gagcttagtgtgattgacagcgtcctggctcgagtgggggccggggacagtcaggtcaaa
ggcgtctccaccttcatgtccgagatgctggagacggcggccattttacgttcagcgaca
aagaactccctgatcattatagacgagctgggcagaggcacctccacctacgacggcttt
ggtctggcctgggcgatctccgagcacatctcctcaaagatcgactgcttctgtctgttc
gccactcacttccacgaactcacggcgctcgccaaccagcagccgaccgtacacaacctg
cacgtgaccgccctcaccacccaggacactctcaccatgctctacaaggtcaaaccaggc
gtgtgcgatcagagcttcgggatccacgtggccgagctcgcctgtttcccggcggcggtg
gtggcggcggcgaaggagaaggcgtccgacctggaggagtttcaggagctcgcggcagaa
gaagaaaaagaggaggggccagagagcaagaggagacgcaccgacaaacaggccggtgaa
ggtctgatcatggacttcctggagaaggtgaggtcacttcctgtctccagcatggacgac
gccgaggtgaagtcggagctgcagaggatgaaggacgaactggcatctaaaaacaacagc
tacatctcagagatcctcaaaagatgtgtttctgttaaataa
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