Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110175242
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Entry
110175242 CDS
T05002
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110175242 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110175242 (cstf3)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110175242 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_6
TPR_19
VapC50_C
Motif
Other DBs
NCBI-GeneID:
110175242
NCBI-ProteinID:
XP_020797035
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MTSEAAADQAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVTQ
FPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKHEKVH
GIYNKLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDPRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGNLSPEK
SGEIWARFLAFESNIGDLASILKVERRRFAAFKDEYEGKETALLVDRYKFMDLYPCSTSE
LKALGYKDVSRAKLAALLPETVVAPSVPILKDEIDRKPEYPKPDTNQMIPFQPRHLAPPG
LHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDELMETFRRCTLPETVEAAVELITG
RLPDAQGEGNGAMENHAIVKSLKRPNADSDEEDDKGAIAPPIHDIYRARQQKRIR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgaagcagcagccgatcaggctgcagagtatattccagagaaggtgaagaag
gcagaaaagaagttggaagaaaatccatatgaccttgacgcatggagcattctgattcga
gaagcacagaatcaaccaatagataaagcccggaagacctatgagcgactagtcacccag
tttccaagttcaggcagattctggaaacttttcatagaggctgagatcaaggctaaaaac
tatgacaaggttgaaaagttgtttcagagatgcttaatgaaagttttgcacattgacctg
tggaaatgttacctttcatatgtcagagagaccaaaggaaaactacctagttacaaagaa
aagatggcccaggcctatgactttgcccttgataagattggtatggaaatcatgtcatat
cagatctgggtggactatatcaactttctcaaaggggttgaggctgttggctcatatgca
gagaatcagcgtatcactgcagtgcgaagggtctaccagcgaggctgtgtcaaccccatg
attaacattgagcaactctggagggattatagcaaatatgaagaggggataaatgtgcat
ctggcaaaaaagatgattgaggatcgaagcagagactacatgaacgccaggagggtggca
aaggagtatgagactgtgatgaagggactggatagaaatgctccctcagtgccaccccag
aattccccacaggaggcccaacaagtggagatgtggaagaaatacatccagtgggaaaaa
agcaatccattgcgcacagaagaccagactctcatcacaaaaagagtcatgttcgcttat
gagcagtgtctattagtgcttggtcatcatcctgacatatggtatgaagcagcacaatac
ctggaacagtccagcaaactgttggctgaaaagggggacatgaataactcgaagttattc
agtgatgaagcagctaacatctatgaacgcgctattggcactttgctgaagaaaaatatg
cttctatacttttcatttgcagactatgaggagagccgtatgaagcatgaaaaggtgcat
ggcatctataataaactgctggctattgaagacatcgaccccacactcgtatacattcag
tacatgaagtttgcccgaagagcagaaggcatcaagtcaggtcgaaccatctttaaaaaa
gccagggaagatccacgcactcgtcaccatgtgtatgtcactgctgcactcatggagtat
tactgcagcaaagacaaatctgtggccttcaagatttttgaacttggtttgaaaaaatat
ggtgacattcccgagtacatacttgcctacatagactacctctcacatctcaatgaggat
aacaacacacgggtcttgtttgagcgagttcttacatcaggaaatttgtctcctgaaaag
tctggtgagatctgggctcggttcttagcttttgagagcaacataggtgacctggccagt
attcttaaagtggagcgcaggcgttttgctgcttttaaggatgagtatgaaggcaaagaa
actgccttgcttgtagacagatacaagttcatggacttgtatccctgctctaccagtgaa
ctcaaagctcttggatacaaggatgtatctcgtgccaaactggctgcactacttccagag
acggtggtggctccttctgtgcctatactgaaagatgaaattgaccgtaaaccagagtat
cctaaacctgatactaatcaaatgatccccttccagcctcgtcaccttgcccctcctggt
ttacacccagtccccggtggagtatttcctgtcccaccagcggctgtggtattaatgaaa
cttttgcctccacctacatgctttactggaccctttgttcaagtggatgagctcatggaa
acattcaggagatgcactcttcctgagactgttgaagctgctgtggagttgatcactgga
agacttcctgatgcacagggagagggcaatggggccatggagaaccatgctatcgtcaag
tcactcaagaggcctaacgcagactccgatgaggaggacgacaagggagctattgcacct
cccatacatgacatttaccgtgcccgccaacagaagcgaatccgatag
DBGET
integrated database retrieval system
