Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110175325
Help
Entry
110175325 CDS
T05002
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110175325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpec03021
]
110175325
03036 Chromosome and associated proteins [BR:
bpec03036
]
110175325
Transcription machinery [BR:
bpec03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110175325
Coactivators
SAGA/TFTC/STAGA complex
110175325
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110175325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
110175325
NCBI-ProteinID:
XP_020797142
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLTGQSNAPGKPDENGGAGSVAHANHHLGK
TLPAPGGIITQEQQQQGRCNKPGMRQGNNSKSAIPDKSITSPSSDCSQSFGETSTSPPAA
VNASNSSLQSHGASVTTLSAAGVSTLTSTVSISTAANRSHKVSSSPTETSTGVISPRKRL
TTPRRTAAAARVKSLNGAALTTRRNSSNTATAESPGESSASPNSPRSAPPSANTSTFTLS
SGQAAIALDRGTPTIALHRLPNHIVASIAQNGTSVSALVERGAHIGPVNTTGTHHSTKEA
GDSVTPCTEESLSKSELSSQTAHMNSDNNSSDTASTPTTLAATTTVTTTTTNQPLNSASM
APSNLSVVATSSICGTGQSTVTTITTVARPAAASPTPAVVTSPQPRPGVTAPQRIVTPQL
IVRPPQQQTTIQLPPGFTIPPGMVLVRTELGQLVMVPQHALAQAQAQAQAQNNTSPRPAM
PTTGTPFRVTTPQSPVIPQTNRQCALTPSKMAPSPCPPPSSPVHQTPSSSSSSSCPALRP
KGPVAVAVTTSQQTPVVIAPQVSSQAASQSVPAAQTAIATTPGAPVVSQEMQENVKKCKN
FLATLIKLASHNSPSPETSKNVKALVQDLLDAKIEPEEFTSRLQTELKSSPQPYLVPFLK
KSLPALRLSLLNSQQSLTQPPQQGIKPVPSSVAPAIVTGPAVRTRHPNSVTTNXGASTLP
AMGVKATGAVSGQVRMPVVITQSIRAQGTMGKGTTIQAGKSPIGLAVQISGNQKNKLNDP
GGGSFRDDDDINDVASMAGVNLNEESARILATNSELVGTQIRSCKDEAFLHPGLLHRRIL
ETAKKYGVTEVPMEAVTFISHATQSRLRTMVEKVSTIAQHRLDSCKEDESYEQTADVRSQ
LRFFEQLERIEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRD
ANLTALAAIGPRKKRKLDSPGSTPSGTEVAGSMASSPAGSSAPSSSSRQYTRQRITRVNL
RDLIFYMEQERDMAHSVLLYRALLK
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgctcttttcagaggtggatgaaaaggct
gtgagtgacctagtgggatcgttggagtctcagcttacaggccaaagcaacgcaccgggt
aaaccagacgaaaacggaggtgctggctcagtggcacatgctaaccatcacttgggaaaa
acgctcccagctccaggaggtatcataacacaggaacaacaacaacaaggacgctgtaat
aaacccgggatgcgccagggtaacaattcaaaaagcgccattccagataaaagcatcacc
tctccttcttcggactgctcacagtctttcggtgagacatccacttctccacctgccgct
gtgaacgcctctaacagcagcctacaatcacatggagcatccgtcacaacactatctgca
gctggcgtgtcaactctgacatctacggtcagcatcagcaccgcggcaaaccggagccat
aaggtctcatccagtccgaccgaaacctcaacgggggttatatcaccgagaaagcgctta
actaccccgcggaggactgctgctgctgcccgcgttaagagtttgaacggagccgctcta
acgacgaggaggaacagcagcaacaccgcaacagcagaatctcccggagagagcagcgca
tcacccaactcgcccaggtctgcacctccctctgcgaacacttcaacttttaccctttcg
tcagggcaggctgcgattgctctagaccggggtactcctactattgctctccacagacta
cctaaccatatcgtggccagcatagcccaaaacggtaccagtgtatccgctttggtagag
cggggtgctcacataggacccgtcaacaccacaggaactcatcacagtactaaagaggct
ggagattcagtgactccctgtactgaagaatctctctctaaatctgaactgtcaagtcag
actgctcatatgaattcagataacaattcatcagatactgcctctacccccacaacatta
gcagctacaacaacagtaaccactacaaccaccaatcaacctctgaactctgcatctatg
gctcccagtaatctttcagtggtggcaacatcatctatatgtggtactggacaatctaca
gtcactacaattactactgtggccagaccagccgctgcctctccaacacctgccgttgtc
acttctccacagccccgtccaggagtcacagcacctcaaaggattgtaactcctcagttg
attgtcagaccacctcaacagcaaacaacaatacagctccctcctgggttcaccattcca
cctggaatggtgttggtgcgcacggaactcgggcagctcgtgatggttcctcagcatgct
ttggcccaagcccaggcacaggcacaggcccaaaacaacactagcccacgcccagccatg
cccaccactgggactcccttcagagttactactccacagtctcctgtgatccctcagacc
aacagacagtgtgctttgaccccatccaagatggccccttctccctgtcctcctccatcc
agtcctgtccaccagaccccatcgtcttcctcctcttcctcctgtcctgcactgcgccct
aagggccctgtggcagtggctgtgacgacatcacagcagacccctgtggtgattgccccc
caggtttcatcccaggctgcttctcagtcagtgccggcggctcagacggccatcgccacc
acacctggagcacctgtcgtgtcccaggagatgcaagagaatgtgaaaaaatgtaagaat
tttctggctactctgatcaaacttgcatctcacaactctccatcccctgagacatccaag
aatgtcaaagctctggttcaggacctactggatgctaagattgagcctgaggagtttacc
agccgccttcagactgagctgaaatcatctccacaaccgtacttggtcccatttcttaag
aaaagcctaccggccctaagactgtccttgctgaacagtcagcagtcactgacacagcct
cctcagcagggaatcaaacccgtgcccagcagtgtggcccctgccatcgtgactggacca
gctgtccgcacacgacaccctaatagtgtgaccaccaatnntggtgccagtactcttcct
gcaatgggtgtcaaggcaactggtgctgttagtgggcaagtgcgcatgccagtggtgatc
acgcagtccattagagcacaaggcacaatggggaaaggaaccactatccaggctggcaaa
agtcccatcggcctggctgttcagatctctgggaatcagaaaaacaagctcaacgacccc
ggaggaggctctttcagagatgacgatgacatcaatgacgtggcctctatggctggggta
aacctcaatgaggagagtgcacgaattttggctaccaactcagagctggtgggaacccag
atccgctcatgcaaagatgaagccttcttacatccaggcctactccacagacgcattctc
gaaacagccaagaaatatggagtcacagaggtaccaatggaggcagtgacattcatttca
catgccacgcagtctcgacttcggacaatggtggaaaaggtctccactattgcgcagcac
cgacttgactcctgtaaggaggacgagagctatgagcagactgcagatgtgcgttcccag
ctccggttcttcgagcagctggagagaatcgagaagcagaggaaggacgaacaggagcga
gaaattctactgaaagctgcaaaaagccgctccaggcaggaagacccagagcaagcacga
ctgaaacagaaagctaaggagatgcaacagcaggaactagcgcagatgagacagcgagat
gctaaccttacagccctagcagccattggtccacgtaagaaacggaagctagactcacct
gggagcacaccatcagggacagaggttgctggtagtatggccagttctccagcaggctct
tcagccccttcctcctcctcacgccaatacacacgccagcgcataactcgggtcaacctc
agggacttaatcttctacatggagcaagagagagacatggcccactcagtgctgctgtac
cgggctttgctcaagtag
DBGET
integrated database retrieval system
