Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110175422
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Entry
110175422 CDS
T05002
Name
(RefSeq) nucleolar RNA helicase 2-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpec03009
]
110175422
03036 Chromosome and associated proteins [BR:
bpec03036
]
110175422
Enzymes [BR:
bpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110175422
Ribosome biogenesis [BR:
bpec03009
]
Eukaryotic type
Pre-60S particles
Helicases
110175422
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110175422
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
AAA_30
Cas3-like_C_2
ERCC3_RAD25_C
Gly_acyl_tr_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
110175422
NCBI-ProteinID:
XP_020797252
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MSSLCRFGGLHQVKERSEMPSKISVEDACEAMEGEVDSVAPNNPSVNKIKEGKKKKKKEQ
ITDLEECEPPAPKKKKKKDKQKEDHMNKTTDLNGNLHSEETTKQIKKTDSEKKKKKENKA
IAEEENGHSPVNTPTMMPIQTPSHSSEDSASDSEKEAVETPEQREGAFSNFRISQVTIDR
LKARGVSYLFDIQVKTFDSVYDGDDVIAQARTGTGKTFSFALPLVEKLQKNGADKTRGRA
PKVLVLAPTRELAIQVAKDFKDIAKRLAIACFYGGSSYNPQIDAIRNGIDILVGTPGRIK
DHIQNHKLDLSKLKHVVLDEVDQMLDMGFAEQVEEILASSYKKDSDSNPQTLLFSATCPQ
WVYEVAKKYMRPNCKHVDLIGKKMQKAATTVEHLAIACHWSQRAAVIGDVIQVYSGSHGR
TIIFCETKKEANELAMNSSIKQSSQSLHGDIPQKQRELTLKGFRNGAFEVLVATNVAARG
LDIPEVDLVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKACITF
RRVGVPTANDIIKSSSKDAVRFLDSVPVAAIGYFKESAQRLIEERGAVEALAAALAHISG
ATSLEQRSLLNSDAGYTTLQLVCSQEMHNLGYAWRTIKEQLGEEIENHIHRMTFLKGKTG
VCFDVPADKVKQIQESWTDGRRWQLTVATELPELEEKPGNRSDRGFGSGNRGDRSGGFRG
GRGRNFRNGGFRNGGGGYGNSRGGGGQKRSFSQAFDY
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgagttccctctgtagatttggtgggctacatcaagtgaaggaaagaagtgaaatgccg
tctaaaatctcggttgaagacgcgtgcgaagcaatggaaggagaggtagactccgtggca
ccgaacaacccctcagtgaataagatcaaagagggcaagaaaaagaaaaagaaggagcaa
attacggaccttgaagaatgtgaacctccagcacccaaaaagaagaaaaaaaaagataaa
caaaaagaggaccacatgaataaaaccacagacttaaatggcaacctacattcagaggaa
acaacaaagcaaattaaaaaaacagactcagagaaaaaaaagaaaaaagaaaacaaagca
attgcagaagaagaaaatggacattcccctgttaatactcctaccatgatgcctattcaa
acaccatctcattcaagtgaggactctgcaagtgacagtgagaaggaggctgtggaaaca
ccagagcagagggaaggtgccttttcaaacttcaggatatctcaagtcaccatagatagg
ctgaaagctcggggggtctcatacctgtttgacattcaagtgaagacctttgattcagtt
tatgatggagacgatgtaattgctcaagcccggacaggaactggaaaaactttctctttt
gctcttcctttggtggagaaactacagaagaatggagctgataaaaccagaggccgtgcc
ccaaaggttttggttttggcgccaaccagagagctggccattcaggttgcaaaggacttc
aaagacattgccaaaagactggccattgcctgtttttatggagggagttcatacaaccca
cagattgatgctattcgtaatggtattgacattttggttggcacgcctggacgtatcaag
gaccacattcaaaaccataagctggacctttcaaaactcaaacatgtagtccttgacgaa
gttgaccaaatgttggacatgggatttgctgaacaagttgaagagatattggcctcttct
tataaaaaagattctgactccaatccgcagacattgctgttctcagccacttgtcctcag
tgggtttatgaagtagcaaagaaatacatgaggcccaactgtaaacatgttgacctgatt
ggcaaaaaaatgcaaaaagctgcaacaaccgttgaacatctggccattgcgtgtcactgg
tcacagcgggctgctgtgataggagatgttatccaggtttacagtggcagccatggaagg
actattattttctgtgagactaagaaggaggccaatgagcttgccatgaattcatcgatc
aaacagagttctcaatctcttcatggagatattcctcaaaaacaaagagagctgacactg
aaaggattcaggaatggtgcttttgaagttcttgttgcgacaaatgttgctgctcgaggt
ttagatatcccagaagtggatctggttgttcagtgttcccctccaaaggatgtagagtct
tacatccatcgctcaggccgaacaggccgggctggccgcactggagtgtgcatctgtttc
tatcaaagaaaagaagaggaccaactgcgctatgtagaaaacaaagcttgcatcacattt
agacgggttggtgttccaactgccaatgacatcataaaatcttccagcaaggacgcagtc
aggttcttggactctgtacctgttgcagctattggttatttcaaggaatcagctcaaagg
ctaatagaagaaagaggagctgttgaggcactagcagccgccttagcccatatttctgga
gctacgagtttggagcagcgatcacttctcaactctgatgctggatacacaactctccag
ttagtgtgttcacaagaaatgcacaatcttggttatgcatggagaaccatcaaagaacaa
cttggagaggagattgagaaccatattcacagaatgacgtttctgaagggaaaaactgga
gtttgttttgatgtcccagcagacaaagtcaagcagattcaggaatcctggacggatggt
cggcgctggcaattgactgtagcaacagagctgcccgaacttgaggaaaaaccaggcaat
cgtagcgacaggggatttggtagtggtaatcgtggtgacagatctggagggttcagagga
ggaagaggccgaaacttcaggaatgggggcttccgaaacggtggtggtggctatggcaac
agcagaggaggaggaggacagaaacgtagcttcagccaagcttttgattactga
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