Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110175439
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Entry
110175439 CDS
T05002
Symbol
papd5
Name
(RefSeq) LOW QUALITY PROTEIN: non-canonical poly(A) RNA polymerase PAPD5
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110175439 (papd5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110175439 (papd5)
03016 Transfer RNA biogenesis [BR:
bpec03016
]
110175439 (papd5)
Enzymes [BR:
bpec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
110175439 (papd5)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
110175439 (papd5)
Transfer RNA biogenesis [BR:
bpec03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
110175439 (papd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_assoc
NTP_transf_2
Polbeta
PAP_NTPase
TUTase
Motif
Other DBs
NCBI-GeneID:
110175439
NCBI-ProteinID:
XP_020797275
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MDPRIAWFQPEQRGPANNLWMQIWETTQGLGYLHVNTSFTSGSPNGASGNSCRNWAPNSN
SGIPMEDAELTEQQDFIPLESNSNHNHRASGRGGVGGVGQLGSGVLWRGLTDGLSNKRKR
DNKASTFGYNSSLLHTGNDCNTGRLAEYTGTPWKVRNYSEGIVGLHEEITDFYTYISPRP
EEEKMRLEVVDRIKAVIHDLWPSAEVQVFGSFSTGLYLPTSDIDLVVFGKWETLPLWTLE
EALRRMNVADENSIKVLDKATVPIIKLTDSFTEVKVDISFNVKNGVKAACLIKEYKEKYP
VLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHYRDVCSPNINIGVLLIEF
FELYGRNFNYLKTGIRITDGGCYVAKDEVQKNMMDGYRPSMLYIEDPLQPDNDVGRSSYG
AMQVKQAFDYAYVVLSHAVSPIAKYYPNNETESILGRIIRVTQEVDEYREWIRSNWGNQC
KNELPLNKNDALSQQLDECNNNVPNEEEEEEEDVAXHSKQSSNSSSPSPSLHSSPSSSPL
SPTSTSSSSDADSDGTPCKTAKQQPCRSLVPHREKSVSVANHRTSHGTTTSSTSNKSGKA
RASRFHLKSGHHSQKGSSASTKAHESSRPQHQGNSKKRKNVRDSTHEDLCR
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagaatcgcctggtttcaaccagaacagcgtggaccagctaacaacctgtgg
atgcaaatttgggagacgacacaagggcttgggtacctacatgtaaatactagcttcacc
tctgggtctccaaacggggcgtccggaaacagttgcagaaactgggctcccaattccaac
agcggtatcccaatggaggacgcagaactaacagagcaacaagacttcataccactagaa
agcaacagcaaccacaaccaccgagcctcgggcaggggcggtgttggaggagtagggcag
ctggggagcggggtgctgtggagagggctcacagacggactctccaacaaaaggaaaagg
gacaacaaagctagcacttttggatacaattccagcctcctgcacactggcaatgactgt
aacacaggaagactcgctgaatacacgggcaccccatggaaagttcgaaactactctgaa
ggaattgtagggctacatgaagagataacggatttctacacatacatttccccacggcca
gaagaggagaagatgagactggaggtggttgacagaattaaagccgtcatccatgatctg
tggcccagtgctgaggtgcaagtctttgggagtttcagcactggtctttacctgccaaca
agtgacatagaccttgttgtttttggaaaatgggaaactctcccactttggacactggaa
gaggcacttcgaagaatgaatgttgctgatgagaactctattaaagttttggacaaagcc
actgtacctattatcaaactcactgactcatttactgaggtcaaggtggacattagcttc
aatgttaaaaatggagttaaagctgcttgtcttataaaggaatataaagagaaataccct
gtgctgccttacttggtcctggtgctaaagcagtttctgctgcagagagacctcaatgag
gttttcacaggaggaatcggctcatacagtctgtttctcatggctgtaagcttcctacag
cttcactacagagatgtatgtagtcccaatatcaacattggagttttgcttattgagttc
tttgagctctatggtcgcaattttaactacctgaaaacgggcattaggataacagatgga
ggctgctatgttgccaaagatgaagtacagaagaacatgatggatggatacaggccttcc
atgctctacattgaagaccctctgcagccagacaacgatgttgggcgaagctcatatggt
gctatgcaggtcaagcaggcatttgactatgcatatgtggttctcagccatgctgtgtca
cccattgccaagtactatccaaataatgagactgagagtattcttggcagaataatccgt
gttactcaggaagttgatgagtaccgggaatggataagaagcaattggggcaaccagtgt
aaaaacgaattaccacttaacaaaaatgatgcactatcccaacaacttgatgaatgcaac
aacaatgttccaaatgaggaggaggaggaggaggaggatgttgcatagcacagtaaacag
tcttccaactcttcttcaccatctccatcactgcactcctctccctcatcctctcctctc
tcacccacatccacatccagctccagtgatgctgactctgatggcacaccatgtaagact
gctaaacagcagccctgtcggagcttggtgccccacagagaaaagtctgtctctgtagct
aatcatcgaacgagtcatggcactaccacttcatctacaagcaacaaaagtggcaaggca
agagcgtcccgtttccatcttaagagtggccaccatagtcagaaaggctcctctgccagc
accaaagctcatgagagcagccggccacagcaccaaggcaatagcaagaagagaaaaaat
gtgagagactcgacacatgaagacctgtgcagatag
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integrated database retrieval system
