Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110175556
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Entry
110175556 CDS
T05002
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110175556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110175556
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110175556
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110175556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
110175556
NCBI-ProteinID:
XP_020797416
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETLAQKVDPAQREKEEVGTWLTNTIDTLNMQVDQFE
SEVESLSVQTRKKKGDKEKQDRIEELKKFIEKHRYHIRMLETILRMLDNDSVQVDAIRKI
KDDVEYYIDSSQEPDFEENEFLYDDIDLEDIPPSLMATSPPGHSHLEDEIFQHSSSTPTS
TTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSPVKNGNPSLLSSSSSSSSSVSGLT
SSSFVSMATISGGVANSSSVSVINNSLSNSSHSPSVHLSNNTSAGSYSNATQQPPHPLTQ
PQSILPKNSNSTASAPSTNNHPASSGPSPPNASIQGPITPSSQPPIGSTSNSLGLNLGLS
LSKAPGSIATSPMSSSLGLSGMPASLSSLSGLLSSSTPTPYAQAAAIGTTSGLPGSLGGV
STSLSSVTVGGPTSSSVVGGAIGAGILGLGSSGSSAVQGSSLLSQSPGGNLAPGSGVGVI
GSNGASSGSNSTGSNALSIRPPSQQKQNGSSSYSAVVADSTTDSALNSASQSQNSQSSSL
SSTANQPKDSGPSLLASMSFSSSSPSPASFSEAKTGSGSLLNGPMSYSQPGDSIKEPLSS
LKSMAERAAHSSGLEGDVSSLHLPTDMFPSSTAPSGPPSAPQPSLSEVNIPPSLGVCPLG
PVPLSKDQVYQQAMEEAAWTHMPHPSDSERIRQYLMRNPCPTLPFHHQVPPPHSDTVEFY
QRLSTEXXXXXXXXXXXXXXXXXXXXFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWF
QRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaactccaaggggaaatagatcgatgtctgaaaaaagtagcggag
ggagtggaacagtttgaagacatttggcaaaagcttcacaatgcagctaacgcaaaccag
aaggaaaaatatgaagctgatctcaagaaagagattaaaaaactacagcgtctccgagac
cagatcaaaacgtgggtggcatctaacgagatcaaagacaaacggcagctagtggagaac
cgcaaacttatagagacgctggcccagaaagtggacccggcgcagagggagaaggaggaa
gtcggcacgtggctaacgaatacgatagacacgctaaacatgcaggtggaccagtttgag
agcgaagtggagtctttatcggtccaaaccaggaaaaagaaaggcgacaaagagaaacag
gacagaatcgaggagctgaagaagttcatcgagaagcaccggtatcacatccgaatgttg
gagacgattctgaggatgttggataatgactcggtgcaggtggacgccatcaggaaaatc
aaggatgatgtggagtattacatcgactcttcgcaggagcccgactttgaagagaatgag
tttctttatgacgacatcgatctggaagacattcctccgtcgttgatggctacgtctcct
ccaggacactcgcacttagaggacgagatcttccagcactcgagcagcacccccacctcc
accacctcctcctcccccatccctccttcacctgctacatgcactacagaaaactctgaa
gatgacaaaaagagaggccgatcaacagatagtgaagttagtcagtctcctgtgaaaaac
ggaaacccgtcgctgctctcctcctcttcctcctcatcatcctccgtctcgggtcttacc
tcttcctcgttcgtctccatggcgaccatctcagggggcgtggccaacagcagcagcgtc
agcgtcatcaataacagcctcagtaacagcagccactccccctcagtccacctctccaac
aacacctcagcgggcagctacagcaacgccacgcagcaaccgccgcaccctttgacacaa
ccgcaaagtatcctgcccaaaaattcaaactccactgcctctgcgccaagcaccaacaac
cacccagcgtcttcggggccgtccccacccaacgctagcattcagggtccaatcacgccc
tcgtcccagcctcccatagggtcgacttccaatagtttagggttgaatttggggctgtct
ctcagtaaagcgcccggttccatagcgactagcccaatgtccagcagtcttggtttatca
gggatgccggcgtcccttagttcgttatcaggcttattatcaagttcaaccccgactccg
tacgcccaagctgcagcgataggaactacttctggtcttcctgggtcgctaggcggagtt
agcacatctttaagttcagttacagtaggcggtcccacgtccagttcggtggtagggggc
gctatcggggcagggattttgggtttggggtcttcaggttcctccgcggtgcaggggtct
tcgttgctctctcaaagcccaggagggaatctggcgccgggcagcggagtgggcgtcatc
gggagcaacggagccagctcagggtccaacagcacagggagcaacgcactgtccatcagg
ccgcccagccagcagaagcagaacgggagctccagttacagtgctgtggtggccgacagc
acaacagactccgccctcaacagtgccagccaatcacagaacagccaatcctcatctctc
tcctctacagccaatcagcctaaagacagtggccccagtcttctggcgtccatgagtttc
tcgtccagctcgccgtcgcccgcctccttcagtgaagccaaaacaggaagtgggtctctg
ctgaatggaccaatgtcgtactctcagcccggagacagcatcaaggagcctctgagcagc
ctgaagtcgatggccgaacgcgccgcacacagctcagggttagagggggacgtgtcctca
ctgcacctgcccacagacatgttccccagctccacggccccctccggccccccctcggcc
cctcagccctctctgtcagaggtgaacatcccgccctctttgggggtctgtcctctgggc
cccgttcctctgtccaaagaccaggtttaccagcaggccatggaggaggctgcctggacg
cacatgccccacccgtctgactctgagagaatcagacagtacctgatgaggaacccctgt
cccacgctgcctttccaccaccaggtgccaccaccgcactcagacactgtcgagttctac
cagagactgtccacagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnttcatcttctactacctggagggcactaaggcccagtatctg
gcagccaaagccctgaagaagcagtcgtggaggtttcacacaaagtacatgatgtggttc
cagagacacgaggagcctaagaccatcaccgacgaatttgagcagggaacatacatttac
tttgactatgagaaatggggccagaggaagaaggagggattcacgttcgagtatcggtat
ctggaggacagggacttacagtga
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