Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110175615
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Entry
110175615 CDS
T05002
Name
(RefSeq) collagen alpha-1(XVIII) chain-like
KO
K06823
collagen type XVIII alpha
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpec04147
]
110175615
00535 Proteoglycans [BR:
bpec00535
]
110175615
00536 Glycosaminoglycan binding proteins [BR:
bpec00536
]
110175615
Exosome [BR:
bpec04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110175615
Proteoglycans [BR:
bpec00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
110175615
Glycosaminoglycan binding proteins [BR:
bpec00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110175615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Motif
Other DBs
NCBI-GeneID:
110175615
NCBI-ProteinID:
XP_020797478
LinkDB
All DBs
Position
Unknown
AA seq
1322 aa
AA seq
DB search
GGGSVSGQPALALLPNPFYRYFSMLFHIKPTSSSASVLLALTDGPQKIMYVGVKLSAVRD
GKQKVQFFYTEPDSEGSYEAASFTVPSMVNTWSRFALAVFEEEVTFYHGCDSAPQTIRFE
RSPDPMDLDKASGVFIGQAGGADPDKFQGEVLEMRLVGNPREAERLCDGDDDSDTASGDF
GSGDGERTQTSYTVKTTPPSLRPVPEPPIVASKGGRMTGPVGAKGEKGDRGEKGAKGDRG
IAGPKGEAGTAHTSGSSTAGGERGQKGEKGAKGSSGIGYPGNKGDRGLPGPQGLPGAPGP
AAEVVRLGNGAVVQQVPGPQGPPGFPGLDGPPGPPGADGEPGDPGEDGKVGQTGPRGPPG
SKGSSGAKGQKGERGEGQPGPRGPPGPPGPPGLGTGDRPTFLDMEGSGFTDMDKIRGPRG
PPGPPGPPGPPGTSVTFDANGPVAIGPPGPPGLDGIPGLHGPPGPPGAPGQPGPRGEKGD
CGCEGDLSSSTGGQKGSSFFDGLFSYFSPAHSLSNASEGAQGDPGQPGTPGQSGLAGLPG
PMGPMGPPGPPGPPGLPYGFSDGDEGNNGISTIRGPPGPEGPPGVPGLPGKPGLPGNHGD
KGAEGPRGPPGIPGQDGFPGQEGFKGDKGAKGEMGLPGRDGGPPGPPGPPGPPGQIIYQS
AGDYNDLFWSEGWEEGRDGAVGRAGSPGPVGEKGDKGDVGPPGFAPKGEKGEPGIIMGPD
GRPMYLGGLAGKPGDPGPPGPMGPPGPVGPQGQKGEIGFPGRPGRPGLNGLKGERGDSSG
GYSYPGPPGPPGPPGPPGPPAPYVNTHTGYDDHSRHYPATKGDKGDRGEPGFPGLPGGGP
QFDIHTLRGHFKGEPGSKGEKGEPGGGYYDPRYGASFGSPGVPGPPGPKGDSIIGPPGFP
GLPGPPGQGNDGLPGPPGPPGPPGATVSVDGRGVQTISMPGPPGPPGAPGVPGHSSGVTV
LRTYDTMRATARGQPEGSLVYVLDKTDLYLRVRDGVRQVQLGSYIPLPYEDGNEVAAVVP
PPVVPYSPDVRYPSQPDPRYPSHPDPQTPSQAEPQPASQPDLRYPFQPDPRYPSQPDPRY
PSQPDPRYPAPTDPRFPSYTERIHQPDGRFTIHPSIHEAQDRRYYPYYPVTPQRPPNRPP
AQEQHQHTGGPGLHLLALNSPQTGAMRGIHRADLLCFSQAQAIGLKGTFRAFLSAKLQDL
HSIVRKADRQSAPILNLKDEVLFDSWENIFSNGRMKDVPIYSFDGKNVMTDSTWPQKLVW
HGSTAEGQRHMDSYCETWRVGEQTLTGMSSALQSGQLLQQTSTSCSSPLIVLCIENSYHP
SF
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
ggcgggggctctgtgtcaggacagcctgctctggccctgctgcccaaccccttctacagg
tatttctccatgctcttccacatcaaacccacgtccagctccgcgtcagttctgctggca
ctcaccgacggccctcagaagatcatgtatgtgggggtgaagttgagtgcagtgcgagat
gggaagcagaaggtgcagttcttctacacagagcctgactctgagggctcgtatgaggct
gcaagcttcacagtgcccagcatggtgaacacgtggtcccgctttgctctggctgtgttt
gaggaggaggtcaccttctaccacggctgtgattccgcccctcagaccattcgcttcgag
cgctcccccgaccccatggacctggacaaggcctcaggggtgttcataggccaagctggg
ggagcagacccagacaagttccagggtgaggttctggagatgcggctggtggggaaccca
agagaagccgagcgcctctgtgacggagatgacgactcggacactgcatctggggacttt
ggcagtggagatggagaacggacacaaacgagctacacagtcaaaaccacccccccctct
ctgcggccggtcccggagcctcccatcgtggcgtccaaagggggcaggatgacaggtcca
gttggggccaaaggagagaagggagacagaggagagaaaggtgccaagggtgaccggggc
atcgcaggacccaaaggagaggcgggaactgctcacacatccggatcctccacagcggga
ggcgagcggggacagaagggagaaaaaggggcaaagggcagctcaggcattggttaccct
ggaaacaaaggggatcgtgggctcccaggaccacaagggctccctggagccccaggtcct
gcagcagaggtggtccgacttggaaacggcgctgttgtgcagcaagtacctggaccccag
ggaccacctggatttccaggtctggatgggcctccaggacctccaggagcagacggagaa
ccgggagatccaggcgaggatgggaaagttgggcaaacaggcccccgagggcctcctgga
agtaaaggcagctctggagccaaaggacagaagggagagcgtggagagggacaaccaggg
ccccgtgggcccccaggaccccctggaccaccagggctgggcactggtgaccgacccaca
ttcctggatatggaaggctctggatttacagatatggacaaaatccggggcccccgtggt
cccccgggccctccaggccccccaggtcctcctgggacatcagtcacttttgatgccaat
ggtccagtggccattggccctcctggaccacctggactggatggaatacctggtctacat
ggacctccaggacctcctggagcacctggtcaacctggacccagaggagagaagggagac
tgtggctgtgaaggagacttgagctcctccacaggcgggcagaagggctccagttttttc
gatgggctcttctcttactttagccccgcccactcgctgtctaacgcctctgagggtgct
cagggtgatcctggacagccaggcacacctggtcagagcgggttagcaggtctcccagga
ccaatgggaccaatgggacctccaggaccaccggggcctccgggcctcccctacggtttc
tctgatggtgatgaagggaacaatggtatatcaactatcaggggccctccaggaccagag
ggccctcctggtgtcccagggctgcctgggaagcctggtttacccggtaaccatggagac
aagggtgctgaaggcccccgtggtcctcctgggatcccaggccaggatggcttcccagga
caggaaggatttaaaggagacaaaggagccaaaggagaaatgggcttacccggtcgagat
ggaggcccacctggacctcctggccctcctgggcctccaggacagataatctaccaatct
gcaggcgattataacgaccttttttggagcgaagggtgggaggaggggagagacggtgct
gtggggagagcaggatctccggggccagtaggagagaagggtgacaagggagatgtgggc
cctcctggcttcgccccgaagggcgagaaaggtgaacctggcatcatcatggggccggac
gggcgacccatgtacttgggtggtcttgccggaaaaccgggggatccagggcccccagga
cccatgggacccccaggccctgttggacctcaaggacaaaagggagagattggtttccct
ggtcgtccaggccgacctgggctcaatggtctcaaaggagagagaggcgactccagcgga
ggatactcataccctgggcctcctggaccccctgggccccccggacctcctgggccccct
gcaccttatgttaacacacatacgggctatgatgaccactccaggcactatccagcaact
aaaggagacaagggtgatcgtggagagccaggttttccaggtctgccaggagggggcccc
caatttgacatccacacactgaggggtcatttcaaaggagaaccaggatctaagggagag
aaaggagagccaggtggtggatactacgaccctcgctacggagctagttttggatctcca
ggagtgcccggccctccgggccctaagggagactccattattgggccccctggatttcca
ggactgcctggtcctccaggacaaggcaatgacggcctgccaggacctccagggcctccc
ggacctccaggagcaaccgtatctgtagatggacgaggtgtacagaccatcagcatgcct
ggccccccaggaccccctggagcacctggtgtacctggacattcttcaggggtgacagtt
ctgcgcacatatgataccatgagagccacagcgcgggggcagcctgagggttccctggtc
tatgttctagacaagactgacctgtacctccgtgtccgggacggagtccgccaagtgcag
ctcgggagctacattcctctgccttatgaagatggaaatgaagtagctgctgtggtgcca
cccccagttgtcccctactccccagatgttaggtacccttctcagcctgatcctcggtat
ccctcccatcctgacccacagaccccctctcaggcagaaccccagcctgcttctcagcct
gatctccgataccccttccagcccgatcctcggtatccctctcagcctgaccctcgctac
ccttcccaacctgatcctcggtatcctgctcccactgacccccgtttccccagttacaca
gagcggatacaccagccagatggtaggttcaccatccatccatccatccatgaggcccag
gaccggaggtactacccttactaccctgtaacacctcagaggccccccaacagacccccc
gcccaggagcagcaccagcacacaggtggaccagggctccaccttttggccctgaacagt
cctcagacgggggccatgcggggcatccacagggctgacttgctgtgcttcagccaggcc
caggccatcgggctgaagggaaccttcagagccttcctgtccgctaagctccaggacctg
cacagcatcgtgcgcaaagctgaccgccagagcgcccccatcctcaacctcaaggatgag
gtcctgttcgacagctgggagaacatcttcagtaatggcaggatgaaggacgtgcccatt
tactcctttgatggcaagaacgtgatgactgatagcacatggccgcagaagctggtgtgg
cacggctcaacagcagaggggcagaggcacatggacagttactgtgagacatggagagtt
ggagagcagactctgaccgggatgtcctcagctctgcagagcggccagctgctccaacaa
acctccaccagctgctccagcccgctcatagtactgtgcattgagaacagctaccacccc
agcttctag
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