Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110175733
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Entry
110175733 CDS
T05002
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110175733 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpec03021
]
110175733 (taf5)
03036 Chromosome and associated proteins [BR:
bpec03036
]
110175733 (taf5)
Transcription machinery [BR:
bpec03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110175733 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
110175733 (taf5)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110175733 (taf5)
STAGA complex
110175733 (taf5)
TFTC complex
110175733 (taf5)
SAGA complex
110175733 (taf5)
SLIK complex
110175733 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
NBCH_WD40
ANAPC4_WD40
Nup160
PROPPIN
CDK5RAP3
RAB3GAP2_N
DUF5849
Motif
Other DBs
NCBI-GeneID:
110175733
NCBI-ProteinID:
XP_020797602
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MAAVQGSLVDSEEEKDIKTDPSSDVCGSSNNINDAKPVSNTPGTNAPSGSTKPSVGTAEE
QQTLLAVLQFLRKNNLSESVEILRREAGLPEDLLDLKDADGSGAGSGGTAAGVGLEGGDA
SSLLSRVTVAASGVQAPTKATSDDQPDVSVVLSAYSQQGDPTLYEVYYSDLKKFIETVLD
CHRAELSQVFYPLFVHMYLELVYNSHENEAKSFFQRFSGDQECYYENDLRVLSSLTKREH
MKGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKS
QIDAMSGSLAGEAKRDANKSKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDSL
GSKSKKQDPNAPTQTRIPLPELKDSDKLDKIMYMKESTKRIRLGPETLPSICFYSFLNAY
QGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAAELNLIDKESDDVLERIMDE
KTASESKILYGHSGPVYGISFSPDRNYLLSSSEDGTIRLWSLLTFTCLVGYKGHNYPVWD
TQFSPHGYYFISGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYAATGSSDRT
IRLWDVLNGNCVRIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGIMVGELKGH
TDTIYSLRFSRDGEILASGSMDYTVRLWDSMKAFDDLETDDFTATTGHIHLQDNSQELLL
GTYTTKSTPVIHLHFTRRNLLLAAGAYNP
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacaaggtagtctggtggattcagaggaagagaaggacattaaaacagat
ccatccagtgatgtatgtggaagtagcaataatataaacgacgcgaaacccgtctctaac
acgcccgggactaatgctccttctggatccaccaaaccctccgtagggacagcggaggag
cagcaaaccctgcttgcagttctgcaattcctcagaaagaacaacttgagcgagtccgtc
gagattttacgccgtgaagctggtttacctgaagatctactggaccttaaagatgctgat
ggttctggggccggctctggtggaacggcagccggagtgggtcttgaaggaggggatgcg
agctctctgctcagtcgggtgaccgtggctgcgtccggagtccaggcgccaacaaaagct
acaagtgatgatcagcctgatgtgagtgttgtcctatcagcctacagccagcaaggagac
ccaactttatatgaggtttactacagtgaccttaaaaagtttatagaaacggttttggac
tgtcaccgagcagagctatcccaagtcttttacccactatttgtccatatgtatctggag
ctggtgtacaacagtcatgaaaacgaggccaagtcgttttttcaaaggtttagcggagat
caggagtgttattatgaaaatgacctcagggttttgtccagtctgaccaaaagagagcac
atgaagggcaatgagactctactagactttcgcaccagcaaatttgtcctgcgcatttcc
cgcgactcatatcagcttttaaaaagacacttgcaggaacgacagaataaccaaatctgg
aatatcatccaggagcatctttacattgatatttttgatggcatgccacgaagcaaaagt
caaattgatgctatgtccggcagcttggctggtgaggcaaaacgagatgccaataaatcc
aaggtatattatggactactgaaggaaccagaaattgaactacctctcgatgatgaagat
gaggaggccgaaaacgaagaggggaaacccaagaaaaagaaacctaagaaggatagtttg
gggtccaagagcaaaaagcaggacccaaacgcacccacacaaacaagaatacctttacca
gagctcaaggactcagacaaattagacaagatcatgtatatgaaagagtccactaaaaga
attcgcctcggaccagaaacacttccttccatttgtttttattcatttcttaatgcatat
cagggtctgactgcagtagacttcacagatgactccagtttaatcgcgggtggctttgct
gactctacagtacgtgtgtggagtgtcacaccaaagaagcttcgcaaggtcaagtctgca
gcagagttaaacctcattgacaaggagtcagatgatgtgctagagaggatcatggatgaa
aaaactgccagtgagtcaaagatcctctatgggcacagtggcccagtatatggaatcagc
ttcagtccagacagaaattatcttttgtcaagttctgaggatggtactatcagactgtgg
agtcttctaacatttacatgtctggtgggctacaaaggccataactaccctgtgtgggac
actcagttttcccctcatgggtattactttatctctggaggacatgacagagtagctcgt
ttgtgggcaactgaccactaccaacccttgaggatatttgctggtcacttggcagatgtc
acatgcacacgcttccacccaaactcgaattatgcggccacagggtcatctgatcgcaca
attcgtctttgggatgtgctgaatggaaactgtgttcgaatatttactggacacaaggga
cctatacatgcactagctttctctcccaatgggaagtttctggcttcgggagcaacagat
ggtcgagttcttctttgggacattggacatggaataatggtgggagagttaaaaggccat
actgacaccatatattctctaagatttagccgggatggagagatccttgcatcaggatcg
atggattatacggttcgcctctgggactcaatgaaagcgtttgatgacctagagacagat
gactttacagctacaacaggacacatccatctgcaagataattcccaagaactcttgctt
ggcacatacacgaccaaatcaacaccagtaattcaccttcacttcacaagaagaaatctg
ttgcttgctgcaggagcctataatccttaa
DBGET
integrated database retrieval system
