Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110175751
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Entry
110175751 CDS
T05002
Symbol
ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpec03041
]
110175751 (ddx17)
Enzymes [BR:
bpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110175751 (ddx17)
Spliceosome [BR:
bpec03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110175751 (ddx17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
HECT
Motif
Other DBs
NCBI-GeneID:
110175751
NCBI-ProteinID:
XP_020797623
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MRGGSYGDRDRDRDRDRGRDRPRFGAPSGRSSGPPPMKFGNPGERLRKKRWNLDELPKFE
KNFYTEHQEVQRMTQYDVEEFRRKKEITLRGSGCPRPVTAFHQAQFPQYVMDTLMQQNFK
EPTSIQAQGFPVALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAP
TRELAQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAG
KTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLR
DYIQINVGALELSANHNILQIVDVCMENEKDNKLIQLMEEIMAEKENKTIIFVETKKRCD
DLTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVIN
YDYPSSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLL
DSGRGGGGGGGRMRFRGNNSNNPNLMYQEETERRMRTGGAGKDGRSSFSRDSRNNRDGDR
SNSSSSFRDRDRRNSFNNSDQYNNYNSGGGSYNSRSGPPGGGGGPDQPNQPQGQYNQPPP
PPPTGAPQPLMAQQFPPPQPPLMGFMGQPPYPFNAPPPPPPGPPPPRK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggtggctcttatggagaccgagacagggacagggaccgagaccgcggtcgagac
agaccacggtttggggcaccaagtggtcgaagcagtggcccaccacctatgaagttcgga
aatccaggggagcgccttcgtaaaaaaagatggaacttagatgaactgcccaagtttgaa
aagaacttttacactgaacaccaagaagtacagcgaatgactcagtacgatgttgaagag
tttcgccgaaagaaggagatcacacttcgaggctcgggatgtccacggcctgtgacagct
tttcaccaggcccagtttcctcagtatgtaatggatacactgatgcagcaaaacttcaaa
gagcccacatccatccaggctcagggtttccctgtggctttgagtggcagagacatggtg
ggcattgctcagactggttctggaaaaacactgtcttatcttctccctgctattgtccac
atcaatcaccagccatacttggagaggggtgatggtccaatttgtttggtgcttgcacct
accagagagctggcccagcaagtccaacaggttgcatatgactatggaaagtcttcacgg
atcaaaagcacttgtgtctatggtggagcacccaaaggaccgcagatccgagatcttgag
agaggtgtggaaatttgcattgccacccctggtcgtctcatagattttttggaggcaggg
aagactaacctacgtcgatgtacgtacttagtgctggacgaggccgaccgcatgcttgac
atgggctttgagcctcaaattcgcaaaatagtggagcaaattaggcctgaccgacagacc
ttgatgtggagtgcaacctggccaaaggaagttcgacagcttgctgaagattttctcaga
gactacatccaaatcaacgttggtgccctagagctgagtgccaaccacaatatcttgcaa
atagtggatgtttgcatggaaaacgaaaaggacaacaaacttattcaacttatggaggag
attatggctgaaaaggagaacaaaaccattatttttgtagagaccaagaagcgttgcgat
gatctaactcggaggatgaggcgagatggttggcctgctatgtgtatccatggagataag
agccaaccagaaagagactgggtgctcacagaattcagaagtggcaaagcccccattctg
attgccaccgatgtagcttcacgtggtctggatgtggaggatgtcaagttcgtcatcaac
tatgactatcccagctcctctgaggactacgttcaccgtataggacgtacagcccgcagc
accaacaaaggcactgcctacacgttcttcactccaggaaacctgcgccaggcccgagac
ctggtccgagtgctggaggaggcccggcaggccatcaaccccaaactgctacagctcctg
gactcagggcggggaggaggaggaggcggtggacgcatgcgcttccgtggtaacaattct
aacaaccccaacctcatgtatcaagaggaaactgagcgccgcatgcgcacaggtggagct
ggcaaagacggacgcagcagcttcagccgtgacagccgcaataaccgcgacggggaccgc
tccaactcctcttcttccttcagagatcgagaccgtagaaacagcttcaacaactcagac
cagtacaacaactacaacagtggtggcggcagctacaactcccgcagtggcccaccaggg
gggggtggtggtccggaccaacccaaccaaccccagggtcaatacaaccagccaccccca
cctccacccactggagccccacagcctctcatggctcagcagtttcccccacctcagccc
ccccttatgggcttcatgggccagcctccataccccttcaacgccccacctccaccccct
ccaggacctccacctcctcgaaagtaa
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