Bacteroides pectinophilus: NQ488_00030
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Entry
NQ488_00030 CDS
T09080
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bpen
Bacteroides pectinophilus
Brite
KEGG Orthology (KO) [BR:
bpen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpen03032
]
NQ488_00030 (gyrA)
03400 DNA repair and recombination proteins [BR:
bpen03400
]
NQ488_00030 (gyrA)
Enzymes [BR:
bpen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NQ488_00030 (gyrA)
DNA replication proteins [BR:
bpen03032
]
Prokaryotic type
DNA Topoisomerases
NQ488_00030 (gyrA)
DNA repair and recombination proteins [BR:
bpen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NQ488_00030 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
DUF4611
Motif
Other DBs
NCBI-ProteinID:
UWN95746
LinkDB
All DBs
Position
6190..8715
Genome browser
AA seq
841 aa
AA seq
DB search
MDEHIFDKVHDVDLQKTMEDSYIDYAMSVIASRALPDVRDGLKPVQRRILFSMIELNNGP
DKPHRKCARIVGDTMGKYHPHGDSSIYEALVKLAQDFSTRYPLVDGHGNFGSVDGDGAAA
MRYTEARLSRISMEMLADINKNTVDFIPNFDETEKEPTVLPSRYPNLLVNGTSGIAVGMA
TNIPPHNLREVINAVVKIIDNQVEEDRDTTIEEILNIVKGPDFPTGAMILGKMGIEEAYR
TGRGKIRVRAVTDIEPMANGKNRIVVTELPYMVNKAKLIEKIAELVREKKIDGITDLRDE
SDRSGMRISIELRRDVNPNIVLNQLFKHTQMQDTFGVIMLALVDNQPKVLNLLDMLIYYL
RHQKEVITRRTQYDLNKAEERAHILQGLMIALDNIDRVISIIRGSENVQTAKESLMKEFE
LSDVQAQAIVDMRLRALTGLERAKLEAEYAELIKKIEEYKAILADEKKLLGVIRTEILVI
ADKYGDDRRTSIGFDEFDISMEDIIPDEPVVIARTNLGYIKRMTLDNFKAQHRGGKGIRG
MQTIDQDYIEDLFMTTSHHYLMFFTNTGRAYRMKAYEIPEAGRTARGTAVINLLQLQPGE
TITAVIPIREYNDNNYLFMATRNGIVKKTKVTEYSNIRKNGIQAITIRDNDELIEVKLTD
DTKDIMLVTKLGMCIRFKETDVRPTGRTSMGVIGMDLMDEDQVVGMQIDSQGDSLLIVSE
KGLGKRTLIEEFTTQHRGGKGVKCYKINEKTGNVVGVKAVDDTREIMLITTEGIIIRIKA
QDISILGRITSGVKLINLEDGVTVASVSKVRRKPQDGDDHDADGFDEEDEEDSEDENNTD
N
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacatatctttgacaaggttcatgatgtagacctgcagaagacaatggaagac
tcatatatcgattatgccatgagtgtaatcgcatcaagagcgcttccggatgtaagagac
ggtttgaagcctgtgcagagaagaatcctcttctcaatgatagagttgaataacggacct
gacaagcctcatagaaaatgtgcccgtatcgtcggtgatacaatgggtaaataccaccca
cacggtgactcatcaatatacgaggcacttgttaagcttgcccaggatttctcgacaaga
tatccgcttgtagacggacatggtaacttcggttctgttgatggtgacggtgctgccgcc
atgcgatacacagaggcaagattaagccgtatttccatggagatgctggcagacataaat
aaaaacactgttgattttatacctaacttcgatgagactgagaaggagcctacggtgctt
ccttcaagatatcctaatctgcttgttaacggaacatcaggtatcgcggtaggtatggca
actaatatacctccgcataatctgcgcgaggttattaatgctgttgttaagattatagat
aatcaggttgaagaggacagagacacaactatcgaggagatacttaatattgttaaggga
cctgacttccctaccggagccatgattcttggcaagatgggaatagaggaggcatacagg
acaggaagaggcaagattcgtgtccgcgccgtaacagatatagagcctatggccaacggc
aagaacagaattgttgttacagagcttccttacatggtcaacaaggctaagcttatagag
aagatagctgagcttgtaagagagaaaaagatagatggaataacggatcttcgtgatgag
tctgacagaagcggtatgagaatatcaatcgagctgagaagagacgttaatcctaacata
gtgcttaaccagctttttaagcatacacagatgcaggatacatttggtgttattatgctt
gcacttgtagataaccagccgaaagtacttaatcttcttgatatgctgatatattacctc
aggcaccagaaggaagtcataaccagaaggacacagtacgacctcaacaaagcagaggag
cgtgcacacattttacagggattaatgattgctctcgataatattgacagagtaatatct
ataatccgtggttcggagaatgtacagacagccaaggaaagcctgatgaaagaatttgaa
ctttcggatgttcaggcacaggcaattgtagacatgcgtctgcgtgctcttacaggtttg
gaaagagccaagctggaagcagagtatgctgaacttataaagaaaatcgaggaatataag
gcaatacttgctgatgagaagaagcttctcggcgtaatcagaactgagattcttgttata
gcagacaaatatggtgatgacagaagaacatctatcggattcgatgagtttgacatatcc
atggaagatataattccggacgaaccggttgttattgcgagaactaacctcggatatatc
aagagaatgacacttgataatttcaaggcacagcatcgcggcggtaagggtatcagggga
atgcagacaattgatcaggattatattgaagaccttttcatgacaacgtcacatcattat
ctgatgttctttactaatacgggaagagcttacagaatgaaggcttatgagattcctgag
gcaggaagaactgcaagaggaactgcggtaatcaaccttctgcagcttcagccgggtgag
actataactgcagtcatacctataagggaatataatgataacaactatctgtttatggca
acacgtaacggaattgtcaagaagaccaaggttactgaatattccaatatcaggaaaaat
ggcattcaggcgataacaatacgtgacaatgacgagcttatagaggttaagcttactgat
gacaccaaggatataatgctcgttacaaagcttggtatgtgcataagatttaaagaaact
gatgtacgtcctacaggaagaacgtcaatgggtgtaataggaatggatcttatggatgaa
gaccaggtagtaggcatgcagattgacagtcagggagattcacttcttatagtttcggaa
aaaggtctcggcaagagaacactgatagaagagtttacaacacagcaccgtggcggcaag
ggtgtgaagtgttataagatcaacgaaaagacaggtaatgtagtcggagttaaggctgtt
gatgacacaagagagattatgctcataacaacagagggcataattatcaggattaaggct
caggatatatcaatacttggaagaataacatcaggtgtcaagctgattaatcttgaagat
ggcgtaactgttgcatctgtttcaaaggtcagaagaaagccacaggatggtgatgatcac
gacgcagacggatttgatgaagaagacgaggaagacagcgaagatgagaacaatacagac
aactga
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