Bacteroides pectinophilus: NQ488_01875
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Entry
NQ488_01875 CDS
T09080
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
bpen
Bacteroides pectinophilus
Brite
KEGG Orthology (KO) [BR:
bpen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpen03032
]
NQ488_01875
03036 Chromosome and associated proteins [BR:
bpen03036
]
NQ488_01875
03400 DNA repair and recombination proteins [BR:
bpen03400
]
NQ488_01875
DNA replication proteins [BR:
bpen03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NQ488_01875
Chromosome and associated proteins [BR:
bpen03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NQ488_01875
DNA repair and recombination proteins [BR:
bpen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NQ488_01875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Peptidase_C80
HU-CCDC81_euk_2
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-ProteinID:
UWN96082
LinkDB
All DBs
Position
411958..412233
Genome browser
AA seq
91 aa
AA seq
DB search
MNKTELVAAMSEKSELTKKDSEKALKAFMDVVAEELKKDEKIQLVGFGTFEVAKRAARTG
KNPQTGKAIKIPATKAPKFKAGKALKDTVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataagacagagttagttgcagcaatgtcagagaagtcagaattgacaaagaaggac
agcgagaaggcattaaaggcattcatggatgtcgttgcagaagagcttaagaaggatgag
aagatccagcttgtaggcttcggtacattcgaggttgccaagagagcagcaagaacaggt
aagaacccacagacaggcaaggctattaagattcctgctacaaaggctcctaagttcaag
gctggtaaggcacttaaggatactgttaataagtaa
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