Bacteroides pectinophilus: NQ488_04170
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Entry
NQ488_04170 CDS
T09080
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpen
Bacteroides pectinophilus
Pathway
bpen03420
Nucleotide excision repair
bpen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NQ488_04170 (pcrA)
03430 Mismatch repair
NQ488_04170 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpen03400
]
NQ488_04170 (pcrA)
Enzymes [BR:
bpen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NQ488_04170 (pcrA)
DNA repair and recombination proteins [BR:
bpen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQ488_04170 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NQ488_04170 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
ResIII
AAA_12
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
UWN96513
LinkDB
All DBs
Position
898529..900829
Genome browser
AA seq
766 aa
AA seq
DB search
MSIYDTLNEQQKQGVFTTEGPVLILAGAGSGKTRVLTHRIAYLIEEQGVNPWNILAITFT
NKAASEMRERVDKVVSMGAEHVWVSTFHSMCVRILRRYIDRIGYDTNFTIYDSDDQKSIV
REAIKKLNIDSKTFKERAVLSAISAAKDNLESPQDMREAAGSDYNLSTIARIYDEYQRVL
KINNALDFDDLIVKTVELFLTDDDVLEYYQDRFRYIMVDEYQDTNTAQFRLVSILAGKYK
NLCVVGDDDQSIYKFRGANIHNILNFEDAFPGATVIKLEQNYRSTQNILNAANNVIANNI
GRKQKTLWTDNGDGEKVHFTTYDDAYAESYGVASTISAKVTDGWNYNDCAILYRTNAQSR
ALEEKLVQSNIPYKIYGGVNFYQRKEIKDILAYLKTIDNGKDSQAVKRIINVPKRGIGAT
TINKVQEYADERGISFFDALMRADEITTLGRSASKLKPFITYICALRAKVQSLSLEQLVE
DMLEEIRYREYLLDGDTPEEVAAREENIDELINKIVTYEEECEDDKPTLSGFLEEVALVA
DIDNLDENSNHVMLMTIHSAKGLEFPIVFMTGMEDGLFPSYMSIVSEDRDALEEERRLCY
VGITRAKKELYLSSARIRMVRGETQYNKVSRFIKEIPDELMAVSGETSFDKRKEKAEEPK
PAHSRRAASFMSTAYSSAMGSYISNASNAKPNTKVGFGREFSSDIFDLEKKKGLSYGVGD
RVLHARFGMGTVAGIVEGARDYEVSVDFDEFGRKKLLAGFAKLKKS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttacgatacattgaatgaacagcagaaacagggagtcttcacaacggaaggt
cctgtactgatacttgcgggagcaggttcgggtaagacaagagtacttacacacaggatt
gcatacctgattgaggagcagggagttaatccgtggaacattcttgcaataacatttacc
aacaaggcagcatctgagatgcgtgagcgtgttgataaggttgtgagcatgggagcagaa
catgtgtgggtaagcacatttcactctatgtgtgtaagaattctgagaagatatatagac
agaatcggatatgataccaattttacaatatatgattcggatgaccagaagagtattgta
agagaggcaataaaaaagctgaatatcgacagcaagactttcaaggaaagagctgtgctt
agcgcaatctcagcagctaaggataatcttgaatctccgcaggatatgcgggaagcggcg
ggaagtgattataacctttcgactatcgccaggatatatgatgagtatcagcgtgtactt
aagattaataatgctcttgattttgatgatcttatagttaagacggttgaactcttcctg
acggatgatgatgtgctggaatattatcaggacagattccgctatataatggttgatgag
tatcaggacaccaatacggctcagttcaggcttgtcagcattcttgccgggaagtataag
aacctttgtgtcgtaggtgatgatgatcagtcaatctataagttcagaggtgctaatata
cataatatcctgaattttgaagatgcatttccgggggcaacggtaatcaagcttgagcag
aattaccgttcaacccagaatattcttaatgctgccaataatgtaattgccaacaatatc
ggaagaaagcagaagacgttgtggacagataacggtgacggcgaaaaggtgcattttaca
acatatgatgatgcgtatgccgagagctatggagtagcatcaacaataagcgccaaggtc
acagacggctggaattataatgactgcgctattctttacaggactaatgcacagtcgaga
gcgctggaagagaagcttgtacagtctaatatcccttataagatatatggcggggttaat
ttttatcagcgcaaagagattaaggatattctcgcttatcttaagacaattgataatggc
aaagacagtcaggccgtgaagagaattataaatgtacctaagcgcggtataggtgctaca
acaattaacaaagtccaggagtatgcggatgagcgtggaataagtttttttgatgcgctt
atgagggctgatgagattaccactcttggaaggtcagcgtcaaagcttaagccgtttata
acttatatatgtgcactcagggctaaggtacagtcgctgtctttggaacagcttgttgag
gatatgcttgaggagataaggtacagagaatatcttcttgacggagatacacctgaggaa
gttgcagcaagggaagagaatattgatgaacttatcaataagattgtgacatatgaagag
gagtgcgaagatgacaagccaacgctgtccggatttctcgaggaagttgcacttgttgct
gatattgataatcttgatgagaacagtaatcacgttatgctgatgacgattcacagtgcc
aagggacttgaatttccgattgtatttatgacaggaatggaagatgggctttttccgagc
tatatgtcgattgtgtctgaggaccgggatgcattggaagaagagcgaaggctctgttat
gtcggaattaccagagccaagaaggagctttaccttagcagtgccagaataagaatggtg
agaggagagacacagtataacaaagtgtcccgttttatcaaagagattcctgatgaactg
atggctgtgtcaggtgagacaagctttgacaagagaaaagaaaaggcagaagaacctaaa
ccggcacacagcaggcgtgctgcttcatttatgtcgacagcatattcttcagcgatgggc
tcatatataagcaatgcaagtaatgccaaacctaatacaaaggtgggattcggcagggaa
ttttcttctgacatattcgaccttgagaaaaagaaagggctctcatacggagttggcgac
cgtgtattgcatgccaggtttggaatgggaacggttgcaggaattgttgaaggtgcacgt
gattacgaagtcagtgttgattttgatgagttcggacgtaagaagctccttgcaggattt
gccaagctgaaaaaatcataa
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