Bacteroides pectinophilus: NQ488_05925
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Entry
NQ488_05925 CDS
T09080
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bpen
Bacteroides pectinophilus
Pathway
bpen03030
DNA replication
bpen03430
Mismatch repair
bpen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NQ488_05925 (holA)
03430 Mismatch repair
NQ488_05925 (holA)
03440 Homologous recombination
NQ488_05925 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpen03032
]
NQ488_05925 (holA)
03400 DNA repair and recombination proteins [BR:
bpen03400
]
NQ488_05925 (holA)
Enzymes [BR:
bpen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NQ488_05925 (holA)
DNA replication proteins [BR:
bpen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NQ488_05925 (holA)
DNA repair and recombination proteins [BR:
bpen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NQ488_05925 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
YdaS_toxin
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
UWN96835
LinkDB
All DBs
Position
1267736..1268713
Genome browser
AA seq
325 aa
AA seq
DB search
MKFLNEHIKNNTFKQVYLIYGEETYLVYQYRDRLKQAIIGDDTMNYSCYEGAKIDIKELL
TTADTLPFFADRRLIVVQDSGFFKSSTEGLAEYIRSMPEYLHMIFIESEVDKRNRVYKAV
SEKGYVSEMKYQPDSVLIRWVEGLVKAEGRTITRPAVQHLLDKTGVQMSNIRTEVEKLIC
YTLDKPEITEADIDEICTTQIQNKIFDMITAISMKRQKEALDLYYDLLMLREPPMRILYL
ITRQFNMMLQVKELVLQRYDQAAIAKQLGIAGFLVNKYVNQSKHFAAEQIREALEYFAES
ETAVKTGRLDDKMAVELIIVKYSKK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttttaaatgaacatataaagaataacacatttaagcaggtataccttatatat
ggcgaagagacatatcttgtatatcagtatcgtgacaggctgaagcaggctattatcggt
gatgatacaatgaattacagctgttacgaaggagctaagattgatattaaggaactgctt
acaactgcggatacgctgccgttttttgcggatagaaggcttatagtagtgcaggacagc
ggatttttcaagagctctacggaagggctggctgaatatatccgcagcatgccggaatat
ctgcatatgatatttattgagagtgaggttgacaagcgtaacagagtatacaaggcggtg
agtgaaaaaggctatgtatcagagatgaagtatcagcctgactcagtgctgatacgctgg
gtggaaggccttgtaaaggctgaaggcaggaccataacgcgtccggcggtgcagcatctg
cttgataagaccggtgttcagatgagcaatataagaacagaggttgagaagcttatatgc
tacactcttgataagcctgagattacagaagctgatattgatgagatatgcactacgcag
atacagaataagatatttgatatgataactgcaatatcgatgaaacgccagaaggaggca
cttgatctgtattatgacctgctgatgctgagggaacctcctatgagaattctgtatctt
ataacaaggcagttcaacatgatgctccaggtcaaggagcttgtgcttcagcgctatgat
caggcggcgattgcgaagcagctcgggatagcgggatttcttgttaataagtatgtcaat
cagtcaaagcattttgcggcggagcagataagggaagcacttgaatactttgcggaatcg
gagactgctgttaagacaggaagacttgatgacaagatggcagttgaacttattatcgta
aagtacagtaaaaagtaa
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