Bacteroides pectinophilus: NQ488_06410
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Entry
NQ488_06410 CDS
T09080
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
bpen
Bacteroides pectinophilus
Pathway
bpen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NQ488_06410 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpen03400
]
NQ488_06410 (recO)
DNA repair and recombination proteins [BR:
bpen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NQ488_06410 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NQ488_06410 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
UWN96927
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Position
1375693..1376469
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AA seq
258 aa
AA seq
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MGNIIMASGMVLSSMPVGEFDRRIVLLTKERGKIAAFAKGARRMNSPLMGVTQPFAFGKF
ELYEGRTSYDIRRADISNYFTEVSSDLDAICYACYFAELADYYGRENLDASQILNLLYMT
LRALANDNIPDELIRYIYEIKLISINGECPNMFECAECRKSEGLHYFSMSRFGIVCDSCV
RNTAGECLEITESAMYTLQYIVSSGIEKLYTFTVREDVLRELAMVAGRIRSRVIDKKMKS
LEMLEMTNSVNNSAVGMH
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatattataatggcatcggggatggtactttcctcgatgcctgttggtgaattt
gacagaagaatagtgctgcttacaaaagaaagaggcaagattgcggcatttgccaagggg
gcaaggaggatgaattctccgctgatgggagttacacagccgtttgcattcggtaagttt
gagctttatgagggaagaacgtcatatgatataagaagggctgacatatcgaattatttt
acggaagtgtcatctgaccttgatgcaatatgttatgcgtgttattttgctgagcttgcc
gattattacggcagggagaatcttgatgcatcgcagattctcaatcttttgtatatgacg
ctcagggcgctggctaatgataatatacctgacgagcttatcagatatatatatgagata
aagcttatcagcattaatggggaatgtcctaatatgtttgaatgtgcggaatgcagaaaa
agtgaggggctgcactatttttcaatgagcaggttcggcatagtatgtgacagctgtgtc
cgtaataccgccggggaatgccttgagataactgaatccgcaatgtatacgttacagtat
attgtgtcatcgggaatagaaaaattatatacatttacagtaagagaagatgtcttgcgg
gagcttgccatggttgcggggcgtataaggtcaagggtaattgacaaaaagatgaagtcg
cttgagatgcttgagatgacaaacagcgtaaataacagtgctgttgggatgcattaa
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