Bacteroides pectinophilus: NQ488_06440
Help
Entry
NQ488_06440 CDS
T09080
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bpen
Bacteroides pectinophilus
Pathway
bpen00260
Glycine, serine and threonine metabolism
bpen00460
Cyanoamino acid metabolism
bpen00630
Glyoxylate and dicarboxylate metabolism
bpen00670
One carbon pool by folate
bpen00680
Methane metabolism
bpen01100
Metabolic pathways
bpen01110
Biosynthesis of secondary metabolites
bpen01120
Microbial metabolism in diverse environments
bpen01200
Carbon metabolism
bpen01230
Biosynthesis of amino acids
bpen01240
Biosynthesis of cofactors
bpen04981
Folate transport and metabolism
Module
bpen_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
bpen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NQ488_06440
09102 Energy metabolism
00680 Methane metabolism
NQ488_06440
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NQ488_06440
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NQ488_06440
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NQ488_06440
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NQ488_06440
Enzymes [BR:
bpen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NQ488_06440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
UWN96931
LinkDB
All DBs
Position
1384963..1386207
Genome browser
AA seq
414 aa
AA seq
DB search
MYSFDEVSGFDPELAKAMDDELNRQRTHIELIASENLVSKAVMAAMGSPLTNKYAEGYPG
RRYYGGCEYVDVVETLAIERAKKLFGCEYANVQPHSGAQANLAAFFALVNPGDTVMGMSL
DAGGHLSHGSPVNISGKYFNIVPYGVNEEGFIDYDEAMRIAKECRPKLIVAGASAYARTI
DFKKFREIADEVGAYLMVDMAHIAGLVAGGQHPSPIPYADVVTTTTHKTLRGPRGGMILC
KSAEFAKEINFNKAVFPGIQGGPLMHVIAAKAVCLKEALDDSFKDYAKGIVDNAQALANG
LMSRGFDLVSGGTDNHLMLVDLRSKNVTGKEVEKLLDAANITCNKNAIPNDPAKPNVTSG
IRLGTAAVTTRGFNTADMDVVAQAIALLVDDVEKNRDEAMALVKTLTDKYPLYE
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtattcatttgatgaagtatcagggtttgatcctgaacttgcgaaagcaatggatgac
gagcttaatcgtcagagaacacacatcgagcttattgcttcagagaatcttgtaagcaag
gcagttatggcagcaatgggaagcccgcttaccaacaagtatgcagaaggatatccggga
agacgttattatggcggatgtgagtatgtagatgttgttgagacacttgcaatcgagaga
gctaagaagctgttcggatgcgaatatgccaatgttcagccacattcaggtgcacaggct
aacttagcagcatttttcgcacttgtaaaccctggggacactgtaatgggaatgagcctt
gatgcaggcggacacctttcacacggctcaccggttaatatttcaggaaagtactttaat
attgttccttatggtgttaatgaggaaggcttcatcgactatgacgaggcaatgagaatt
gcaaaagagtgcagaccaaagcttattgtagccggcgcaagcgcatatgcaagaacaatt
gatttcaagaaattcagagagattgcagatgaagttggcgcatatcttatggtagatatg
gctcatattgcaggtcttgttgcaggtggacagcatccaagcccaatcccatatgcagat
gtagttacaacaactacacataagacattaagaggccctcgtggcggtatgattctttgc
aagagtgctgaatttgccaaggagattaacttcaataaggcggtattcccaggtatccag
ggcggtcctcttatgcatgtaatcgcagctaaggcagtatgcctcaaggaagcattggat
gacagcttcaaggattatgcaaagggaatcgttgataatgcacaggcacttgccaacgga
cttatgagcagaggatttgaccttgtatcaggcggtacagacaatcatcttatgcttgtt
gacctgagaagtaagaatgtaacaggtaaggaagttgagaagcttcttgatgcagctaac
attacatgtaataagaatgcaattcctaatgaccctgcaaagcctaatgtaacaagcggt
atccgtctcggaacagcagcagtaacaacaagaggtttcaatacagcagacatggatgtc
gttgctcaggcaattgcactccttgttgatgatgtagagaagaatcgtgacgaggctatg
gcacttgttaagactcttacagataagtatcctctttacgagtaa
DBGET
integrated database retrieval system