Bacteroides pectinophilus: NQ488_12040
Help
Entry
NQ488_12040 CDS
T09080
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
bpen
Bacteroides pectinophilus
Pathway
bpen00040
Pentose and glucuronate interconversions
bpen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bpen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NQ488_12040
Enzymes [BR:
bpen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
NQ488_12040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Chondroitinas_B
Motif
Other DBs
NCBI-ProteinID:
UWN95288
LinkDB
All DBs
Position
complement(2565822..2568428)
Genome browser
AA seq
868 aa
AA seq
DB search
MGKKRLRTIMDIAAALMAAAGIVLAICPVSIKAGTDSGKTLEDGKWQTVKLGTQSDKMKD
ASYDAASGTLQLNSGSNGKMANTGQSGFVMYYTKVKSDDYNVTVRGRFHVTKVDKADNQS
SFGIIVTDSLGSKDASADYLNQAEICAATKNEATKTCIPGIRTLFGNIDASGKSNNGGTC
DVTQYFDKDATVFKSDNAKNLYYNFEVVKDSNGYVFNYYSDDWSKINYSKRIYNPEKLLK
QDKENVYIGFYASRIGTVEVTDISYEQHTPTAEEKAAVDKSAWADYDKVSVKTFNGTTTS
SDDYIYRFTGNVKGTLTVKDDHGNIYIDGQEISSGDAVKFALSDKGISLPMGDTTFITTV
KPYENAINADGSREYSDRLLLKDYSPVEIKDKVTRKDAVAAGNGIVYVSPQGAADASGTK
EAPVDIATAAAYARAGQTIVLLDGTYNMKTVLSITYSVSGTKDAPITLKAENAGRAVFNG
SSIAKSSDAVISLKGNYWNIYGIDVCNASDGTKGIHVSGSNNTIEMCNIYENGSTGLQIS
YSGGEPSEWWPSGNQIKNCSSYYNCDSKQNDADGFAAKLSVGSDNVFDGCIAYSNADDGY
DLYAKDTEGYGPIEPVTIQNSLAYNNGMLKDGSNSKASGNGFKLGGEGLTGKHVLKNCVA
WNNGGSGIMSNNGPDCRVYNCTSVDNGHFSRTGGTDSRNNYQLTPKNGEKYSGNTGYVLE
NVISFYTAAVTDSGKMSSDKFTLKGQNDDVIYKTNNYICKNIDSRECVNKDGSKVSADWF
ESVDYNNIVPTRDSDGSIDMHGLFVLTDKAPSGVGAVIGAADSYDTAVISSDVPKQNQNT
GKGVIYAVFVVIIAAAAVAYVCVKKKKH
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaaaggttaagaactattatggacattgcagccgcgttaatggctgcagca
ggaatagtattggcaatatgcccggttagtataaaagccggtactgattcagggaaaaca
cttgaagatggaaaatggcagacggttaagcttggaacgcagtcggacaagatgaaagat
gcgtcatatgacgctgcgtcagggactctgcagcttaattcgggcagcaatggtaagatg
gccaataccgggcagtcagggtttgtgatgtattatactaaggtcaaatcagacgattac
aatgtgactgtaagaggaagatttcacgtaacaaaggtagacaaagcagataatcagtct
tcttttggaataattgtcacagacagccttggaagcaaagatgcaagtgctgattacctg
aatcaggccgagatatgtgcagcaacaaaaaatgaggcaacaaagacatgtattccggga
ataagaactctgtttggtaatatagatgcgtcgggaaagagtaataatggtggcacgtgt
gatgtgacgcagtattttgacaaggacgcaacagtgtttaaatcagacaatgcaaagaat
ctgtattataattttgaagttgttaaagacagcaacggatatgtatttaattactacagt
gatgactggagtaagattaattactcaaagcgcatttataatcctgagaagcttcttaag
caggataaagagaatgtgtatataggtttttatgcaagccgtatagggactgtagaggtt
actgatatttcttatgaacagcacacacctacggcggaagaaaaagcagctgttgataaa
tcagcgtgggcagattatgacaaggtatcggttaagacatttaacggaacgactacttca
tccgatgattacatatatcgttttacaggtaatgtaaaaggaacactaacggtaaaggat
gaccatggcaatatatatatagacgggcaggagatatcttcaggagatgcggtaaagttt
gcattgtctgataagggcatcagccttccgatgggtgatactacatttatcacaacggtt
aagccatatgaaaacgctataaatgcagatggcagcagggaatactctgacaggcttttg
ctaaaggattattcacctgtagagataaaagataaagtaacaagaaaagacgcagtggca
gcaggaaacggcattgtctatgtatcaccacagggggcggcagatgcttcaggaacaaag
gaagctcctgtagatatagcaactgcggcagcgtatgccagggcaggccagacaatagtt
ctgcttgacggaacatataatatgaagacggtgctttcaattacatacagcgtaagcgga
acaaaggatgcgcctattacacttaaggctgagaatgcaggcagagcagtgtttaatgga
tcttcaattgccaaatcatcggatgcggtaatctcgttaaaaggtaattactggaatata
tacggaatagatgtatgtaacgcttcagacggaaccaagggaatacatgtgtcaggaagc
aataatacaatagaaatgtgtaatatttatgagaatggttctacaggccttcagataagt
tactccggcggcgaaccgtcagaatggtggccttcgggaaatcagattaagaattgctca
tcatattataattgtgacagtaagcagaatgatgcagatggatttgccgccaagctgtca
gttggcagtgacaatgtattcgacggatgtattgcatattctaatgctgatgacggatac
gatctgtatgccaaggatacagaaggatatggtccgatagagcctgttacgatacagaat
tcacttgcatataataacggaatgcttaaagacggaagtaattccaaggcgagtggtaat
ggcttcaagcttggtggagaaggtcttaccggaaaacatgtgcttaaaaattgtgtggca
tggaataacggaggttcgggaataatgagtaataatgggccggactgccgggtatataat
tgtacgtcagtggataacggacatttttcaagaacgggaggaacggacagcaggaataat
taccagcttacacctaagaacggcgaaaagtattcaggaaatacgggatatgtccttgaa
aatgtaatcagcttttatacggcggctgttaccgattccgggaaaatgtcatctgacaag
tttacacttaaaggacagaatgatgatgtcatctacaaaacgaacaactatatttgtaag
aatatagacagcagggaatgtgttaataaggatggaagcaaggtatctgcagactggttt
gaatcagtggattataataacatagttcctacgcgtgacagtgacggaagtatagacatg
catggattatttgtccttacggataaggctccgtcaggcgtaggtgcagttataggtgca
gcagattcttatgatacggcagtgattagttccgatgttccaaagcagaatcaaaatacc
ggcaaaggtgtaatatatgcagtatttgtggtaataatagcagcagctgcagtggcttat
gtgtgcgttaaaaagaagaagcactag
DBGET
integrated database retrieval system
